Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 HAUS4P1-201ENST00000406739 1145 ntBASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 BX842568.4-201ENST00000421222 227 ntBASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 RNA5SP416-201ENST00000516838 111 ntBASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CRLF3Q8IUI8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.02■□□□□ 0.15
CRLF3Q8IUI8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CRLF3Q8IUI8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CRLF3Q8IUI8 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CRLF3Q8IUI8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CRLF3Q8IUI8 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CRLF3Q8IUI8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CRLF3Q8IUI8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CRLF3Q8IUI8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.02■□□□□ 0.15
CRLF3Q8IUI8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CRLF3Q8IUI8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.02■□□□□ 0.15
CRLF3Q8IUI8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CRLF3Q8IUI8 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 AC129492.6-201ENST00000611383 1305 ntBASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 AC108073.2-201ENST00000464002 357 ntBASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 AC008667.4-201ENST00000607370 168 ntBASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 AL805961.1-202ENST00000641562 540 ntBASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CRLF3Q8IUI8 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CRLF3Q8IUI8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16■□□□□ 0.15
CRLF3Q8IUI8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CRLF3Q8IUI8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16■□□□□ 0.15
CRLF3Q8IUI8 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CRLF3Q8IUI8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16■□□□□ 0.15
CRLF3Q8IUI8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16■□□□□ 0.15
CRLF3Q8IUI8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CRLF3Q8IUI8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CRLF3Q8IUI8 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CRLF3Q8IUI8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CRLF3Q8IUI8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16■□□□□ 0.15
CRLF3Q8IUI8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms