Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AC002347.1-201ENST00000569543 541 ntBASIC14.27□□□□□ -0.13
LRRC28Q86X40 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 MIR4492-201ENST00000581627 80 ntBASIC14.27□□□□□ -0.13
LRRC28Q86X40 MIR600HG-201ENST00000449175 5984 ntBASIC14.27□□□□□ -0.13
LRRC28Q86X40 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRC28Q86X40 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRC28Q86X40 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRRC28Q86X40 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRRC28Q86X40 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRC28Q86X40 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 OR2I1P-210ENST00000642037 4691 ntBASIC14.27□□□□□ -0.13
LRRC28Q86X40 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LRRC28Q86X40 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.27□□□□□ -0.13
LRRC28Q86X40 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LRRC28Q86X40 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 AL161772.1-201ENST00000610494 4412 ntBASIC14.26□□□□□ -0.13
LRRC28Q86X40 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 KRT18P13-201ENST00000400056 1290 ntBASIC14.26□□□□□ -0.13
LRRC28Q86X40 AC023274.1-201ENST00000418278 595 ntBASIC14.26□□□□□ -0.13
LRRC28Q86X40 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 SLC25A6P2-201ENST00000497974 877 ntBASIC14.26□□□□□ -0.13
LRRC28Q86X40 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 AC092865.5-201ENST00000545435 363 ntBASIC14.26□□□□□ -0.13
LRRC28Q86X40 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 PCDHA3-202ENST00000532566 4594 ntBASIC14.26□□□□□ -0.13
LRRC28Q86X40 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC28Q86X40 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRC28Q86X40 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC28Q86X40 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.25□□□□□ -0.13
LRRC28Q86X40 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms