Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 RPSAP43-201ENST00000402237 625 ntBASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 AC112482.1-201ENST00000492080 688 ntBASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 RARRES2P9-201ENST00000565168 469 ntBASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HIST2H3AQ71DI3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 AC004461.1-201ENST00000412461 403 ntBASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 EEF1DP4-201ENST00000446006 880 ntBASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 AL139010.1-201ENST00000454878 894 ntBASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 AC093520.2-201ENST00000561830 333 ntBASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 MIR4469-201ENST00000583919 79 ntBASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
HIST2H3AQ71DI3 AL136982.4-201ENST00000437689 1740 ntBASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 AP000344.2-201ENST00000512987 629 ntBASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.04□□□□□ -0.16
HIST2H3AQ71DI3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms