Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 TREML5P-201ENST00000421694 576 ntBASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 DUX4L27-201ENST00000554796 1261 ntBASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN20Q4JDL3 AC020658.6-201ENST00000623564 1870 ntBASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 FER1L4-210ENST00000615531 5998 ntBASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 AL158211.3-201ENST00000607385 239 ntBASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 AL033527.5-202ENST00000641632 1098 ntBASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 AC136621.1-201ENST00000624017 2304 ntBASIC16.73■□□□□ 0.27
PTPN20Q4JDL3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 AC074338.1-201ENST00000416825 156 ntBASIC16.72■□□□□ 0.27
PTPN20Q4JDL3 TARDBPP1-201ENST00000442013 1203 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms