Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC22.42■■□□□ 1.18
SPHKAPQ2M3C7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC22.42■■□□□ 1.18
SPHKAPQ2M3C7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SPHKAPQ2M3C7 AL096828.3-201ENST00000615354 462 ntBASIC22.42■■□□□ 1.18
SPHKAPQ2M3C7 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC22.42■■□□□ 1.18
SPHKAPQ2M3C7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 MIR663B-201ENST00000408361 115 ntBASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 ACR-203ENST00000529621 708 ntTSL 5 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SPHKAPQ2M3C7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 AC104306.2-201ENST00000451877 341 ntBASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 RPSAP36-202ENST00000494591 1261 ntBASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 AL603832.2-201ENST00000566195 2125 ntBASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 AGER-203ENST00000375065 665 ntTSL 2 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 MIR3615-201ENST00000581999 87 ntBASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SPHKAPQ2M3C7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
SPHKAPQ2M3C7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC22.39■■□□□ 1.18
SPHKAPQ2M3C7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SPHKAPQ2M3C7 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SPHKAPQ2M3C7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SPHKAPQ2M3C7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SPHKAPQ2M3C7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
SPHKAPQ2M3C7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.39■■□□□ 1.18
SPHKAPQ2M3C7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC22.39■■□□□ 1.18
SPHKAPQ2M3C7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 CYP2T1P-202ENST00000641596 2535 ntBASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SPHKAPQ2M3C7 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
SPHKAPQ2M3C7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms