Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC20.87■□□□□ 0.93
COL16A1Q07092 DGAT2L7P-201ENST00000602462 744 ntBASIC20.87■□□□□ 0.93
COL16A1Q07092 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.87■□□□□ 0.93
COL16A1Q07092 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.87■□□□□ 0.93
COL16A1Q07092 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
COL16A1Q07092 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COL16A1Q07092 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL16A1Q07092 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
COL16A1Q07092 RPS15-201ENST00000233609 534 ntTSL 2 BASIC20.86■□□□□ 0.93
COL16A1Q07092 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC20.86■□□□□ 0.93
COL16A1Q07092 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL16A1Q07092 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC20.86■□□□□ 0.93
COL16A1Q07092 SNORD3B-2-202ENST00000571722 791 ntBASIC20.86■□□□□ 0.93
COL16A1Q07092 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC20.86■□□□□ 0.93
COL16A1Q07092 NAT9-211ENST00000580632 799 ntTSL 3 BASIC20.86■□□□□ 0.93
COL16A1Q07092 RPS15-205ENST00000586686 562 ntTSL 5 BASIC20.86■□□□□ 0.93
COL16A1Q07092 RPS15-208ENST00000591804 711 ntTSL 5 BASIC20.86■□□□□ 0.93
COL16A1Q07092 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL16A1Q07092 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC20.86■□□□□ 0.93
COL16A1Q07092 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.86■□□□□ 0.93
COL16A1Q07092 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL16A1Q07092 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL16A1Q07092 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL16A1Q07092 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL16A1Q07092 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL16A1Q07092 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC20.86■□□□□ 0.93
COL16A1Q07092 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
COL16A1Q07092 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL16A1Q07092 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL16A1Q07092 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.86■□□□□ 0.93
COL16A1Q07092 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL16A1Q07092 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC20.86■□□□□ 0.93
COL16A1Q07092 HLA-J-204ENST00000495278 958 ntBASIC20.86■□□□□ 0.93
COL16A1Q07092 REEP5-205ENST00000504247 480 ntTSL 5 BASIC20.86■□□□□ 0.93
COL16A1Q07092 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC20.86■□□□□ 0.93
COL16A1Q07092 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC20.86■□□□□ 0.93
COL16A1Q07092 AL358472.3-201ENST00000608147 415 ntBASIC20.86■□□□□ 0.93
COL16A1Q07092 FO393412.1-201ENST00000619841 382 ntBASIC20.86■□□□□ 0.93
COL16A1Q07092 AL132780.4-201ENST00000624870 1135 ntBASIC20.86■□□□□ 0.93
COL16A1Q07092 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
COL16A1Q07092 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
COL16A1Q07092 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
COL16A1Q07092 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
COL16A1Q07092 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL16A1Q07092 AC087289.5-201ENST00000586076 3175 ntBASIC20.85■□□□□ 0.93
COL16A1Q07092 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL16A1Q07092 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL16A1Q07092 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL16A1Q07092 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.85■□□□□ 0.93
COL16A1Q07092 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC20.85■□□□□ 0.93
COL16A1Q07092 VDAC1P1-201ENST00000439229 848 ntBASIC20.85■□□□□ 0.93
COL16A1Q07092 AC005632.3-201ENST00000605544 308 ntBASIC20.85■□□□□ 0.93
COL16A1Q07092 AC138466.3-201ENST00000619983 221 ntBASIC20.85■□□□□ 0.93
COL16A1Q07092 AC138466.4-201ENST00000623965 852 ntBASIC20.85■□□□□ 0.93
COL16A1Q07092 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
COL16A1Q07092 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.85■□□□□ 0.93
COL16A1Q07092 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.84■□□□□ 0.93
COL16A1Q07092 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL16A1Q07092 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
COL16A1Q07092 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.84■□□□□ 0.93
COL16A1Q07092 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL16A1Q07092 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL16A1Q07092 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL16A1Q07092 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL16A1Q07092 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.84■□□□□ 0.93
COL16A1Q07092 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL16A1Q07092 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC20.84■□□□□ 0.93
COL16A1Q07092 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC20.84■□□□□ 0.93
COL16A1Q07092 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC20.84■□□□□ 0.93
COL16A1Q07092 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC20.84■□□□□ 0.93
COL16A1Q07092 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL16A1Q07092 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC20.84■□□□□ 0.93
COL16A1Q07092 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL16A1Q07092 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL16A1Q07092 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
COL16A1Q07092 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20.84■□□□□ 0.93
COL16A1Q07092 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.84■□□□□ 0.93
COL16A1Q07092 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL16A1Q07092 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL16A1Q07092 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.83■□□□□ 0.93
COL16A1Q07092 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
COL16A1Q07092 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL16A1Q07092 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL16A1Q07092 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
COL16A1Q07092 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
COL16A1Q07092 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL16A1Q07092 AL627231.1-201ENST00000394467 1125 ntBASIC20.83■□□□□ 0.93
COL16A1Q07092 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.83■□□□□ 0.93
COL16A1Q07092 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.83■□□□□ 0.93
COL16A1Q07092 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL16A1Q07092 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
COL16A1Q07092 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC20.83■□□□□ 0.93
COL16A1Q07092 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC20.83■□□□□ 0.93
COL16A1Q07092 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC20.83■□□□□ 0.93
COL16A1Q07092 AC105137.3-201ENST00000617588 984 ntBASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms