Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK5Q00535 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CDK5Q00535 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.41□□□□□ -0.1
CDK5Q00535 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CDK5Q00535 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.41□□□□□ -0.1
CDK5Q00535 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK5Q00535 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDK5Q00535 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.41□□□□□ -0.1
CDK5Q00535 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDK5Q00535 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDK5Q00535 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDK5Q00535 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CDK5Q00535 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CDK5Q00535 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CDK5Q00535 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK5Q00535 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.41□□□□□ -0.1
CDK5Q00535 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.41□□□□□ -0.1
CDK5Q00535 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.41□□□□□ -0.1
CDK5Q00535 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK5Q00535 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDK5Q00535 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.41□□□□□ -0.1
CDK5Q00535 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK5Q00535 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.41□□□□□ -0.1
CDK5Q00535 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK5Q00535 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CDK5Q00535 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.41□□□□□ -0.1
CDK5Q00535 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CDK5Q00535 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.41□□□□□ -0.1
CDK5Q00535 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CDK5Q00535 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CDK5Q00535 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.4□□□□□ -0.1
CDK5Q00535 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CDK5Q00535 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.4□□□□□ -0.1
CDK5Q00535 AC004987.2-201ENST00000395959 1148 ntBASIC14.4□□□□□ -0.1
CDK5Q00535 AL645939.2-201ENST00000427340 991 ntBASIC14.4□□□□□ -0.1
CDK5Q00535 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.4□□□□□ -0.1
CDK5Q00535 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.4□□□□□ -0.1
CDK5Q00535 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.4□□□□□ -0.1
CDK5Q00535 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.4□□□□□ -0.1
CDK5Q00535 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CDK5Q00535 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 AC116407.3-201ENST00000623905 1129 ntBASIC14.4□□□□□ -0.1
CDK5Q00535 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 AL390755.1-201ENST00000623716 2027 ntBASIC14.4□□□□□ -0.1
CDK5Q00535 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.4□□□□□ -0.1
CDK5Q00535 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CDK5Q00535 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.4□□□□□ -0.1
CDK5Q00535 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CDK5Q00535 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.4□□□□□ -0.1
CDK5Q00535 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.4□□□□□ -0.1
CDK5Q00535 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CDK5Q00535 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CDK5Q00535 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.39□□□□□ -0.11
CDK5Q00535 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.39□□□□□ -0.11
CDK5Q00535 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDK5Q00535 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.39□□□□□ -0.11
CDK5Q00535 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDK5Q00535 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDK5Q00535 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.39□□□□□ -0.11
CDK5Q00535 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDK5Q00535 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.39□□□□□ -0.11
CDK5Q00535 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.39□□□□□ -0.11
CDK5Q00535 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.39□□□□□ -0.11
CDK5Q00535 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.39□□□□□ -0.11
CDK5Q00535 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDK5Q00535 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.39□□□□□ -0.11
CDK5Q00535 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.39□□□□□ -0.11
CDK5Q00535 RNA5SP415-201ENST00000517246 115 ntBASIC14.39□□□□□ -0.11
CDK5Q00535 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.39□□□□□ -0.11
CDK5Q00535 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.39□□□□□ -0.11
CDK5Q00535 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDK5Q00535 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.39□□□□□ -0.11
CDK5Q00535 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.39□□□□□ -0.11
CDK5Q00535 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDK5Q00535 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.39□□□□□ -0.11
CDK5Q00535 SPTSSB-204ENST00000617024 1292 ntBASIC14.39□□□□□ -0.11
CDK5Q00535 AL773604.1-201ENST00000617417 272 ntBASIC14.39□□□□□ -0.11
CDK5Q00535 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms