Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CX3CL1P78423 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CX3CL1P78423 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.92□□□□□ -0.34
CX3CL1P78423 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
CX3CL1P78423 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.92□□□□□ -0.34
CX3CL1P78423 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.92□□□□□ -0.34
CX3CL1P78423 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CX3CL1P78423 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.92□□□□□ -0.34
CX3CL1P78423 AC142381.1-201ENST00000426099 345 ntBASIC12.92□□□□□ -0.34
CX3CL1P78423 AC005237.2-201ENST00000434368 219 ntBASIC12.92□□□□□ -0.34
CX3CL1P78423 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.92□□□□□ -0.34
CX3CL1P78423 AC069335.1-201ENST00000489972 472 ntBASIC12.92□□□□□ -0.34
CX3CL1P78423 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.92□□□□□ -0.34
CX3CL1P78423 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.92□□□□□ -0.34
CX3CL1P78423 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.92□□□□□ -0.34
CX3CL1P78423 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.92□□□□□ -0.34
CX3CL1P78423 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.92□□□□□ -0.34
CX3CL1P78423 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CX3CL1P78423 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
CX3CL1P78423 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CX3CL1P78423 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.92□□□□□ -0.34
CX3CL1P78423 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.91□□□□□ -0.34
CX3CL1P78423 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.91□□□□□ -0.34
CX3CL1P78423 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.91□□□□□ -0.34
CX3CL1P78423 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.91□□□□□ -0.34
CX3CL1P78423 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.91□□□□□ -0.34
CX3CL1P78423 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CX3CL1P78423 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.91□□□□□ -0.34
CX3CL1P78423 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CX3CL1P78423 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.91□□□□□ -0.34
CX3CL1P78423 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.91□□□□□ -0.34
CX3CL1P78423 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.91□□□□□ -0.34
CX3CL1P78423 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.91□□□□□ -0.34
CX3CL1P78423 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.91□□□□□ -0.34
CX3CL1P78423 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.91□□□□□ -0.34
CX3CL1P78423 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.91□□□□□ -0.34
CX3CL1P78423 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.91□□□□□ -0.34
CX3CL1P78423 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.91□□□□□ -0.34
CX3CL1P78423 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.91□□□□□ -0.34
CX3CL1P78423 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.91□□□□□ -0.34
CX3CL1P78423 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.91□□□□□ -0.34
CX3CL1P78423 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CX3CL1P78423 FOXO1B-201ENST00000504678 1527 ntBASIC12.91□□□□□ -0.34
CX3CL1P78423 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.91□□□□□ -0.34
CX3CL1P78423 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.91□□□□□ -0.34
CX3CL1P78423 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.91□□□□□ -0.34
CX3CL1P78423 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
CX3CL1P78423 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.91□□□□□ -0.34
CX3CL1P78423 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CX3CL1P78423 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms