Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.12■□□□□ 0.01
GABREP78334 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
GABREP78334 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
GABREP78334 AC099398.1-201ENST00000567919 2776 ntBASIC15.12■□□□□ 0.01
GABREP78334 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.12■□□□□ 0.01
GABREP78334 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GABREP78334 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
GABREP78334 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
GABREP78334 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.11■□□□□ 0.01
GABREP78334 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.11■□□□□ 0.01
GABREP78334 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.11■□□□□ 0.01
GABREP78334 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.11■□□□□ 0.01
GABREP78334 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.11■□□□□ 0.01
GABREP78334 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
GABREP78334 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.11■□□□□ 0.01
GABREP78334 AP000812.2-201ENST00000538934 718 ntBASIC15.11■□□□□ 0.01
GABREP78334 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.11■□□□□ 0.01
GABREP78334 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
GABREP78334 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.11■□□□□ 0.01
GABREP78334 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.11■□□□□ 0.01
GABREP78334 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.11■□□□□ 0.01
GABREP78334 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.11■□□□□ 0.01
GABREP78334 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.11■□□□□ 0.01
GABREP78334 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.11■□□□□ 0.01
GABREP78334 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
GABREP78334 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.11■□□□□ 0.01
GABREP78334 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.11■□□□□ 0.01
GABREP78334 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.11■□□□□ 0.01
GABREP78334 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.11■□□□□ 0.01
GABREP78334 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.11■□□□□ 0.01
GABREP78334 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GABREP78334 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
GABREP78334 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GABREP78334 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 KRT8P37-201ENST00000451609 1420 ntBASIC15.1■□□□□ 0.01
GABREP78334 AL691432.1-201ENST00000596308 1422 ntBASIC15.1■□□□□ 0.01
GABREP78334 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
GABREP78334 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.1■□□□□ 0.01
GABREP78334 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GABREP78334 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.1■□□□□ 0.01
GABREP78334 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.1■□□□□ 0.01
GABREP78334 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GABREP78334 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.1■□□□□ 0.01
GABREP78334 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.1■□□□□ 0.01
GABREP78334 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.1■□□□□ 0.01
GABREP78334 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.1■□□□□ 0.01
GABREP78334 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
GABREP78334 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.1■□□□□ 0.01
GABREP78334 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.1■□□□□ 0.01
GABREP78334 AC243562.2-201ENST00000561247 970 ntBASIC15.1■□□□□ 0.01
GABREP78334 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.1■□□□□ 0.01
GABREP78334 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.1■□□□□ 0.01
GABREP78334 AC009486.1-201ENST00000569860 813 ntBASIC15.1■□□□□ 0.01
GABREP78334 AC124283.3-201ENST00000570869 594 ntBASIC15.1■□□□□ 0.01
GABREP78334 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GABREP78334 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.1■□□□□ 0.01
GABREP78334 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
GABREP78334 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.1■□□□□ 0.01
GABREP78334 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.1■□□□□ 0.01
GABREP78334 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.1■□□□□ 0.01
GABREP78334 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
GABREP78334 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms