Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBA52P62987 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBA52P62987 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBA52P62987 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBA52P62987 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
UBA52P62987 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
UBA52P62987 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBA52P62987 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.87□□□□□ -0.19
UBA52P62987 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.87□□□□□ -0.19
UBA52P62987 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.87□□□□□ -0.19
UBA52P62987 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.87□□□□□ -0.19
UBA52P62987 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
UBA52P62987 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.87□□□□□ -0.19
UBA52P62987 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.87□□□□□ -0.19
UBA52P62987 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.87□□□□□ -0.19
UBA52P62987 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.87□□□□□ -0.19
UBA52P62987 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.87□□□□□ -0.19
UBA52P62987 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBA52P62987 AC023141.13-201ENST00000604991 943 ntBASIC13.87□□□□□ -0.19
UBA52P62987 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
UBA52P62987 AC093028.1-201ENST00000622998 982 ntBASIC13.87□□□□□ -0.19
UBA52P62987 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.87□□□□□ -0.19
UBA52P62987 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
UBA52P62987 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
UBA52P62987 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
UBA52P62987 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.87□□□□□ -0.19
UBA52P62987 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.86□□□□□ -0.19
UBA52P62987 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.86□□□□□ -0.19
UBA52P62987 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.86□□□□□ -0.19
UBA52P62987 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.86□□□□□ -0.19
UBA52P62987 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.86□□□□□ -0.19
UBA52P62987 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 LINC00982-205ENST00000420957 435 ntBASIC13.86□□□□□ -0.19
UBA52P62987 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 AC002558.1-201ENST00000488906 803 ntBASIC13.86□□□□□ -0.19
UBA52P62987 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.86□□□□□ -0.19
UBA52P62987 OR7E47P-204ENST00000575924 449 ntBASIC13.86□□□□□ -0.19
UBA52P62987 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UBA52P62987 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.86□□□□□ -0.19
UBA52P62987 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
UBA52P62987 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.86□□□□□ -0.19
UBA52P62987 AC091812.2-201ENST00000619081 385 ntBASIC13.86□□□□□ -0.19
UBA52P62987 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 AC009336.1-201ENST00000608941 1553 ntBASIC13.86□□□□□ -0.19
UBA52P62987 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 AC006486.2-201ENST00000624246 2199 ntBASIC13.86□□□□□ -0.19
UBA52P62987 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 TUBB8P12-201ENST00000308911 1335 ntBASIC13.86□□□□□ -0.19
UBA52P62987 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 TUBB7P-202ENST00000428444 1305 ntBASIC13.86□□□□□ -0.19
UBA52P62987 TUBB8P7-204ENST00000567960 1332 ntBASIC13.86□□□□□ -0.19
UBA52P62987 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
UBA52P62987 MYO15B-237ENST00000642007 4893 ntBASIC13.86□□□□□ -0.19
UBA52P62987 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBA52P62987 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.86□□□□□ -0.19
UBA52P62987 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.85□□□□□ -0.19
UBA52P62987 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBA52P62987 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms