Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC092127.1-201ENST00000567093 3455 ntBASIC13.76□□□□□ -0.21
AP3S2P59780 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
AP3S2P59780 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S2P59780 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S2P59780 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
AP3S2P59780 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
AP3S2P59780 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
AP3S2P59780 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
AP3S2P59780 AC148477.4-201ENST00000613430 1793 ntBASIC13.76□□□□□ -0.21
AP3S2P59780 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.76□□□□□ -0.21
AP3S2P59780 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.76□□□□□ -0.21
AP3S2P59780 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
AP3S2P59780 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.76□□□□□ -0.21
AP3S2P59780 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.76□□□□□ -0.21
AP3S2P59780 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.75□□□□□ -0.21
AP3S2P59780 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 AC079776.2-201ENST00000641154 1609 ntBASIC13.75□□□□□ -0.21
AP3S2P59780 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S2P59780 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
AP3S2P59780 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S2P59780 PEG13-201ENST00000631594 5667 ntBASIC13.75□□□□□ -0.21
AP3S2P59780 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S2P59780 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.75□□□□□ -0.21
AP3S2P59780 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S2P59780 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.75□□□□□ -0.21
AP3S2P59780 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S2P59780 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S2P59780 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S2P59780 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.75□□□□□ -0.21
AP3S2P59780 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.75□□□□□ -0.21
AP3S2P59780 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.75□□□□□ -0.21
AP3S2P59780 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.75□□□□□ -0.21
AP3S2P59780 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S2P59780 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S2P59780 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
AP3S2P59780 HYMAI.1-201ENST00000620949 238 ntBASIC13.75□□□□□ -0.21
AP3S2P59780 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.75□□□□□ -0.21
AP3S2P59780 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.75□□□□□ -0.21
AP3S2P59780 TMEM191A-211ENST00000637163 1067 ntBASIC13.75□□□□□ -0.21
AP3S2P59780 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
AP3S2P59780 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 AJ011931.1-201ENST00000618749 2492 ntBASIC13.75□□□□□ -0.21
AP3S2P59780 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.75□□□□□ -0.21
AP3S2P59780 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
AP3S2P59780 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.75□□□□□ -0.21
AP3S2P59780 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S2P59780 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
AP3S2P59780 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
AP3S2P59780 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.75□□□□□ -0.21
AP3S2P59780 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
AP3S2P59780 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
AP3S2P59780 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.74□□□□□ -0.21
AP3S2P59780 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
AP3S2P59780 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S2P59780 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S2P59780 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S2P59780 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.74□□□□□ -0.21
AP3S2P59780 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S2P59780 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S2P59780 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S2P59780 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.74□□□□□ -0.21
AP3S2P59780 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S2P59780 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
AP3S2P59780 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
AP3S2P59780 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.74□□□□□ -0.21
AP3S2P59780 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
AP3S2P59780 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms