Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
NR1H2P55055 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.23■□□□□ 0.03
NR1H2P55055 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NR1H2P55055 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NR1H2P55055 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
NR1H2P55055 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NR1H2P55055 AL353593.2-201ENST00000602529 1483 ntBASIC15.22■□□□□ 0.03
NR1H2P55055 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.22■□□□□ 0.03
NR1H2P55055 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.22■□□□□ 0.03
NR1H2P55055 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.22■□□□□ 0.03
NR1H2P55055 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.22■□□□□ 0.03
NR1H2P55055 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
NR1H2P55055 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 AC003669.1-201ENST00000334569 611 ntBASIC15.22■□□□□ 0.03
NR1H2P55055 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.22■□□□□ 0.03
NR1H2P55055 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.22■□□□□ 0.03
NR1H2P55055 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.22■□□□□ 0.03
NR1H2P55055 AC092183.1-201ENST00000469884 875 ntBASIC15.22■□□□□ 0.03
NR1H2P55055 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.22■□□□□ 0.03
NR1H2P55055 RNA5SP416-201ENST00000516838 111 ntBASIC15.22■□□□□ 0.03
NR1H2P55055 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.22■□□□□ 0.03
NR1H2P55055 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.22■□□□□ 0.03
NR1H2P55055 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 DUX4L17-201ENST00000557360 1267 ntBASIC15.22■□□□□ 0.03
NR1H2P55055 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NR1H2P55055 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.22■□□□□ 0.03
NR1H2P55055 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.22■□□□□ 0.03
NR1H2P55055 AC140113.2-201ENST00000604370 208 ntBASIC15.22■□□□□ 0.03
NR1H2P55055 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NR1H2P55055 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.22■□□□□ 0.03
NR1H2P55055 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NR1H2P55055 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.22■□□□□ 0.03
NR1H2P55055 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NR1H2P55055 MYO15B-237ENST00000642007 4893 ntBASIC15.22■□□□□ 0.03
NR1H2P55055 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.22■□□□□ 0.03
NR1H2P55055 AC087481.3-201ENST00000602886 1894 ntBASIC15.22■□□□□ 0.03
NR1H2P55055 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.22■□□□□ 0.03
NR1H2P55055 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.22■□□□□ 0.03
NR1H2P55055 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.22■□□□□ 0.03
NR1H2P55055 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.22■□□□□ 0.03
NR1H2P55055 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.22■□□□□ 0.03
NR1H2P55055 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NR1H2P55055 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NR1H2P55055 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR1H2P55055 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR1H2P55055 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR1H2P55055 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NR1H2P55055 AC041040.2-201ENST00000622926 2899 ntBASIC15.21■□□□□ 0.03
NR1H2P55055 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
NR1H2P55055 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.21■□□□□ 0.03
NR1H2P55055 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NR1H2P55055 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NR1H2P55055 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR1H2P55055 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NR1H2P55055 MIR648-201ENST00000385046 94 ntBASIC15.21■□□□□ 0.03
NR1H2P55055 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.21■□□□□ 0.03
NR1H2P55055 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.21■□□□□ 0.03
NR1H2P55055 KRT18P3-201ENST00000451602 1288 ntBASIC15.21■□□□□ 0.03
NR1H2P55055 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.21■□□□□ 0.03
NR1H2P55055 AC136632.2-201ENST00000512891 861 ntBASIC15.21■□□□□ 0.03
NR1H2P55055 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.21■□□□□ 0.03
NR1H2P55055 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
NR1H2P55055 AC013467.2-201ENST00000605472 835 ntBASIC15.21■□□□□ 0.03
NR1H2P55055 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NR1H2P55055 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NR1H2P55055 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NR1H2P55055 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms