Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.91□□□□□ -0.02
PSMD4P55036 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PSMD4P55036 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.91□□□□□ -0.02
PSMD4P55036 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.91□□□□□ -0.02
PSMD4P55036 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.91□□□□□ -0.02
PSMD4P55036 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.91□□□□□ -0.02
PSMD4P55036 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.91□□□□□ -0.02
PSMD4P55036 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.91□□□□□ -0.02
PSMD4P55036 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.91□□□□□ -0.02
PSMD4P55036 AC018529.1-201ENST00000613063 361 ntBASIC14.91□□□□□ -0.02
PSMD4P55036 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.91□□□□□ -0.02
PSMD4P55036 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 AC011477.6-201ENST00000604980 1927 ntBASIC14.91□□□□□ -0.02
PSMD4P55036 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.91□□□□□ -0.02
PSMD4P55036 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PSMD4P55036 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.91□□□□□ -0.02
PSMD4P55036 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PSMD4P55036 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.91□□□□□ -0.02
PSMD4P55036 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.9□□□□□ -0.02
PSMD4P55036 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 SBF1P1-201ENST00000444527 5631 ntBASIC14.9□□□□□ -0.02
PSMD4P55036 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PSMD4P55036 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
PSMD4P55036 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PSMD4P55036 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
PSMD4P55036 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.9□□□□□ -0.02
PSMD4P55036 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PSMD4P55036 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.9□□□□□ -0.02
PSMD4P55036 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PSMD4P55036 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.9□□□□□ -0.02
PSMD4P55036 RPS8P6-201ENST00000426177 609 ntBASIC14.9□□□□□ -0.02
PSMD4P55036 FAM58DP-201ENST00000428076 619 ntBASIC14.9□□□□□ -0.02
PSMD4P55036 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
PSMD4P55036 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.9□□□□□ -0.02
PSMD4P55036 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.9□□□□□ -0.02
PSMD4P55036 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.9□□□□□ -0.02
PSMD4P55036 AC093520.2-201ENST00000561830 333 ntBASIC14.9□□□□□ -0.02
PSMD4P55036 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
PSMD4P55036 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
PSMD4P55036 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.9□□□□□ -0.02
PSMD4P55036 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.9□□□□□ -0.02
PSMD4P55036 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
PSMD4P55036 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.9□□□□□ -0.02
PSMD4P55036 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.9□□□□□ -0.02
PSMD4P55036 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PSMD4P55036 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PSMD4P55036 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.89□□□□□ -0.03
PSMD4P55036 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PSMD4P55036 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PSMD4P55036 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PSMD4P55036 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.89□□□□□ -0.03
PSMD4P55036 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PSMD4P55036 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PSMD4P55036 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PSMD4P55036 OR2I1P-209ENST00000641730 5365 ntBASIC14.89□□□□□ -0.03
PSMD4P55036 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PSMD4P55036 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.89□□□□□ -0.03
PSMD4P55036 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PSMD4P55036 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.89□□□□□ -0.03
PSMD4P55036 AC092850.2-201ENST00000623821 2697 ntBASIC14.89□□□□□ -0.03
PSMD4P55036 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PSMD4P55036 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PSMD4P55036 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PSMD4P55036 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.89□□□□□ -0.03
PSMD4P55036 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.89□□□□□ -0.03
PSMD4P55036 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.89□□□□□ -0.03
PSMD4P55036 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms