Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
PRIM2P49643 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PRIM2P49643 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PRIM2P49643 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRIM2P49643 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 PMS2P7-201ENST00000506558 1336 ntBASIC15.25■□□□□ 0.03
PRIM2P49643 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PRIM2P49643 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.25■□□□□ 0.03
PRIM2P49643 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.25■□□□□ 0.03
PRIM2P49643 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 MIR574-201ENST00000385209 96 ntBASIC15.25■□□□□ 0.03
PRIM2P49643 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRIM2P49643 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.25■□□□□ 0.03
PRIM2P49643 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.25■□□□□ 0.03
PRIM2P49643 PRYP6-201ENST00000514804 343 ntBASIC15.25■□□□□ 0.03
PRIM2P49643 RARRES2P8-201ENST00000566335 367 ntBASIC15.25■□□□□ 0.03
PRIM2P49643 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.25■□□□□ 0.03
PRIM2P49643 AC073439.1-201ENST00000624121 1774 ntBASIC15.25■□□□□ 0.03
PRIM2P49643 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PRIM2P49643 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PRIM2P49643 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.25■□□□□ 0.03
PRIM2P49643 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PRIM2P49643 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PRIM2P49643 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PRIM2P49643 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PRIM2P49643 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PRIM2P49643 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 AC144831.1-201ENST00000573312 2656 ntBASIC15.24■□□□□ 0.03
PRIM2P49643 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 AC073347.1-201ENST00000421633 2643 ntBASIC15.24■□□□□ 0.03
PRIM2P49643 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PRIM2P49643 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PRIM2P49643 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PRIM2P49643 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.24■□□□□ 0.03
PRIM2P49643 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.24■□□□□ 0.03
PRIM2P49643 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.24■□□□□ 0.03
PRIM2P49643 POLD2P1-201ENST00000511220 997 ntBASIC15.24■□□□□ 0.03
PRIM2P49643 KRT18P58-201ENST00000527480 1120 ntBASIC15.24■□□□□ 0.03
PRIM2P49643 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.24■□□□□ 0.03
PRIM2P49643 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PRIM2P49643 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.24■□□□□ 0.03
PRIM2P49643 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.24■□□□□ 0.03
PRIM2P49643 AC040169.1-201ENST00000565382 521 ntBASIC15.24■□□□□ 0.03
PRIM2P49643 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.24■□□□□ 0.03
PRIM2P49643 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.24■□□□□ 0.03
PRIM2P49643 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PRIM2P49643 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 SBF1P1-201ENST00000444527 5631 ntBASIC15.24■□□□□ 0.03
PRIM2P49643 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.24■□□□□ 0.03
PRIM2P49643 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.24■□□□□ 0.03
PRIM2P49643 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PRIM2P49643 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PRIM2P49643 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.24■□□□□ 0.03
PRIM2P49643 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.24■□□□□ 0.03
PRIM2P49643 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.24■□□□□ 0.03
PRIM2P49643 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.24■□□□□ 0.03
PRIM2P49643 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.24■□□□□ 0.03
PRIM2P49643 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.24■□□□□ 0.03
PRIM2P49643 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRIM2P49643 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PRIM2P49643 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.24■□□□□ 0.03
PRIM2P49643 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRIM2P49643 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRIM2P49643 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRIM2P49643 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.23■□□□□ 0.03
PRIM2P49643 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRIM2P49643 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRIM2P49643 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms