Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.64■□□□□ 0.41
CENPFP49454 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CENPFP49454 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.64■□□□□ 0.41
CENPFP49454 BX323043.1-201ENST00000641006 1765 ntBASIC17.64■□□□□ 0.41
CENPFP49454 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.64■□□□□ 0.41
CENPFP49454 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CENPFP49454 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CENPFP49454 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CENPFP49454 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.63■□□□□ 0.41
CENPFP49454 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.63■□□□□ 0.41
CENPFP49454 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CENPFP49454 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.63■□□□□ 0.41
CENPFP49454 AC011491.1-203ENST00000637688 543 ntBASIC17.63■□□□□ 0.41
CENPFP49454 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.63■□□□□ 0.41
CENPFP49454 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CENPFP49454 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CENPFP49454 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CENPFP49454 ALOX12P2-203ENST00000570921 1945 ntBASIC17.63■□□□□ 0.41
CENPFP49454 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CENPFP49454 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CENPFP49454 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CENPFP49454 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
CENPFP49454 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CENPFP49454 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CENPFP49454 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CENPFP49454 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CENPFP49454 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CENPFP49454 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17.63■□□□□ 0.41
CENPFP49454 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17.63■□□□□ 0.41
CENPFP49454 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.63■□□□□ 0.41
CENPFP49454 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CENPFP49454 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17.63■□□□□ 0.41
CENPFP49454 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.63■□□□□ 0.41
CENPFP49454 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.63■□□□□ 0.41
CENPFP49454 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.63■□□□□ 0.41
CENPFP49454 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.63■□□□□ 0.41
CENPFP49454 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CENPFP49454 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CENPFP49454 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.62■□□□□ 0.41
CENPFP49454 KRT18P43-201ENST00000469825 1281 ntBASIC17.62■□□□□ 0.41
CENPFP49454 AC025181.2-201ENST00000606994 802 ntBASIC17.62■□□□□ 0.41
CENPFP49454 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.62■□□□□ 0.41
CENPFP49454 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.62■□□□□ 0.41
CENPFP49454 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.62■□□□□ 0.41
CENPFP49454 AC022188.1-201ENST00000620960 1664 ntBASIC17.62■□□□□ 0.41
CENPFP49454 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
CENPFP49454 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CENPFP49454 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
CENPFP49454 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CENPFP49454 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CENPFP49454 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CENPFP49454 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CENPFP49454 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.62■□□□□ 0.41
CENPFP49454 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.62■□□□□ 0.41
CENPFP49454 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CENPFP49454 AC245100.5-201ENST00000452108 331 ntBASIC17.62■□□□□ 0.41
CENPFP49454 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.62■□□□□ 0.41
CENPFP49454 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.62■□□□□ 0.41
CENPFP49454 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CENPFP49454 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.62■□□□□ 0.41
CENPFP49454 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CENPFP49454 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CENPFP49454 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CENPFP49454 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CENPFP49454 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CENPFP49454 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.62■□□□□ 0.41
CENPFP49454 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CENPFP49454 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CENPFP49454 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
CENPFP49454 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.62■□□□□ 0.41
CENPFP49454 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CENPFP49454 AC106886.4-201ENST00000623557 2502 ntBASIC17.62■□□□□ 0.41
CENPFP49454 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.62■□□□□ 0.41
CENPFP49454 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CENPFP49454 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.61■□□□□ 0.41
CENPFP49454 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
CENPFP49454 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.61■□□□□ 0.41
CENPFP49454 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.61■□□□□ 0.41
CENPFP49454 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC17.61■□□□□ 0.41
CENPFP49454 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.61■□□□□ 0.41
CENPFP49454 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.61■□□□□ 0.41
CENPFP49454 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.61■□□□□ 0.41
CENPFP49454 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CENPFP49454 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CENPFP49454 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CENPFP49454 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms