Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDC34P49427 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CDC34P49427 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDC34P49427 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
CDC34P49427 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDC34P49427 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CDC34P49427 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.67□□□□□ -0.38
CDC34P49427 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.67□□□□□ -0.38
CDC34P49427 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.67□□□□□ -0.38
CDC34P49427 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 KRT18P1-202ENST00000452408 1331 ntBASIC12.67□□□□□ -0.38
CDC34P49427 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 AC092127.1-201ENST00000567093 3455 ntBASIC12.67□□□□□ -0.38
CDC34P49427 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CDC34P49427 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CDC34P49427 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.67□□□□□ -0.38
CDC34P49427 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CDC34P49427 LINC00552-201ENST00000625151 2579 ntBASIC12.67□□□□□ -0.38
CDC34P49427 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 AC005521.1-201ENST00000393351 872 ntBASIC12.67□□□□□ -0.38
CDC34P49427 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CDC34P49427 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CDC34P49427 POM121L3P-201ENST00000419331 1163 ntBASIC12.67□□□□□ -0.38
CDC34P49427 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.67□□□□□ -0.38
CDC34P49427 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC12.67□□□□□ -0.38
CDC34P49427 KRT18P57-201ENST00000443599 1254 ntBASIC12.67□□□□□ -0.38
CDC34P49427 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CDC34P49427 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CDC34P49427 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.67□□□□□ -0.38
CDC34P49427 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.67□□□□□ -0.38
CDC34P49427 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CDC34P49427 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.67□□□□□ -0.38
CDC34P49427 AL022326.1-202ENST00000641533 845 ntBASIC12.67□□□□□ -0.38
CDC34P49427 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.67□□□□□ -0.38
CDC34P49427 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.67□□□□□ -0.38
CDC34P49427 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CDC34P49427 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.67□□□□□ -0.38
CDC34P49427 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.67□□□□□ -0.38
CDC34P49427 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CDC34P49427 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.67□□□□□ -0.38
CDC34P49427 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CDC34P49427 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CDC34P49427 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.66□□□□□ -0.38
CDC34P49427 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
CDC34P49427 AGAP7P-201ENST00000582299 2062 ntBASIC12.66□□□□□ -0.38
CDC34P49427 AGAP14-201ENST00000624701 2060 ntBASIC12.66□□□□□ -0.38
CDC34P49427 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.66□□□□□ -0.38
CDC34P49427 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.66□□□□□ -0.38
CDC34P49427 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.66□□□□□ -0.38
CDC34P49427 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.66□□□□□ -0.38
CDC34P49427 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CDC34P49427 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CDC34P49427 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.66□□□□□ -0.38
CDC34P49427 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CDC34P49427 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.66□□□□□ -0.38
CDC34P49427 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CDC34P49427 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
CDC34P49427 SLC25A6P2-201ENST00000497974 877 ntBASIC12.66□□□□□ -0.38
CDC34P49427 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.66□□□□□ -0.38
CDC34P49427 AL136038.3-201ENST00000561909 1096 ntBASIC12.66□□□□□ -0.38
CDC34P49427 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC12.66□□□□□ -0.38
CDC34P49427 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.66□□□□□ -0.38
CDC34P49427 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms