Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 AC116165.1-201ENST00000611806 668 ntBASIC15.91■□□□□ 0.14
CSNK1DP48730 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.91■□□□□ 0.14
CSNK1DP48730 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
CSNK1DP48730 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1DP48730 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1DP48730 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1DP48730 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.91■□□□□ 0.14
CSNK1DP48730 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1DP48730 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1DP48730 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1DP48730 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.91■□□□□ 0.14
CSNK1DP48730 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1DP48730 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1DP48730 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.91■□□□□ 0.14
CSNK1DP48730 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CSNK1DP48730 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CSNK1DP48730 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.9■□□□□ 0.14
CSNK1DP48730 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.9■□□□□ 0.14
CSNK1DP48730 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.9■□□□□ 0.14
CSNK1DP48730 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CSNK1DP48730 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CSNK1DP48730 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.9■□□□□ 0.14
CSNK1DP48730 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CSNK1DP48730 AL133267.1-201ENST00000398220 340 ntBASIC15.9■□□□□ 0.14
CSNK1DP48730 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 AC087499.6-201ENST00000411576 835 ntBASIC15.9■□□□□ 0.14
CSNK1DP48730 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.9■□□□□ 0.14
CSNK1DP48730 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.9■□□□□ 0.14
CSNK1DP48730 AC055876.2-201ENST00000531834 546 ntBASIC15.9■□□□□ 0.14
CSNK1DP48730 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.9■□□□□ 0.14
CSNK1DP48730 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CSNK1DP48730 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.9■□□□□ 0.14
CSNK1DP48730 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CSNK1DP48730 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.9■□□□□ 0.14
CSNK1DP48730 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CSNK1DP48730 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CSNK1DP48730 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.9■□□□□ 0.14
CSNK1DP48730 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 AC007541.1-201ENST00000570282 1469 ntBASIC15.9■□□□□ 0.14
CSNK1DP48730 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.9■□□□□ 0.14
CSNK1DP48730 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CSNK1DP48730 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.89■□□□□ 0.13
CSNK1DP48730 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.89■□□□□ 0.13
CSNK1DP48730 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CSNK1DP48730 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CSNK1DP48730 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CSNK1DP48730 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.89■□□□□ 0.13
CSNK1DP48730 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.89■□□□□ 0.13
CSNK1DP48730 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.89■□□□□ 0.13
CSNK1DP48730 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.89■□□□□ 0.13
CSNK1DP48730 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.89■□□□□ 0.13
CSNK1DP48730 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.89■□□□□ 0.13
CSNK1DP48730 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CSNK1DP48730 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CSNK1DP48730 AL132655.2-201ENST00000596276 594 ntBASIC15.89■□□□□ 0.13
CSNK1DP48730 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.89■□□□□ 0.13
CSNK1DP48730 AC000095.1-201ENST00000603208 874 ntBASIC15.89■□□□□ 0.13
CSNK1DP48730 AL158212.4-201ENST00000624062 1286 ntBASIC15.89■□□□□ 0.13
CSNK1DP48730 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CSNK1DP48730 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.89■□□□□ 0.13
CSNK1DP48730 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.89■□□□□ 0.13
CSNK1DP48730 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CSNK1DP48730 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.89■□□□□ 0.13
CSNK1DP48730 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CSNK1DP48730 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CSNK1DP48730 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.89■□□□□ 0.13
CSNK1DP48730 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CSNK1DP48730 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.88■□□□□ 0.13
CSNK1DP48730 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms