Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.64■□□□□ 0.25
MTHFRP42898 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.64■□□□□ 0.25
MTHFRP42898 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.64■□□□□ 0.25
MTHFRP42898 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.64■□□□□ 0.25
MTHFRP42898 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
MTHFRP42898 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MTHFRP42898 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
MTHFRP42898 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.64■□□□□ 0.25
MTHFRP42898 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MTHFRP42898 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.63■□□□□ 0.25
MTHFRP42898 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 KRT8P37-201ENST00000451609 1420 ntBASIC16.63■□□□□ 0.25
MTHFRP42898 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.63■□□□□ 0.25
MTHFRP42898 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MTHFRP42898 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
MTHFRP42898 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MTHFRP42898 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MTHFRP42898 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.63■□□□□ 0.25
MTHFRP42898 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.63■□□□□ 0.25
MTHFRP42898 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.63■□□□□ 0.25
MTHFRP42898 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.63■□□□□ 0.25
MTHFRP42898 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.63■□□□□ 0.25
MTHFRP42898 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.63■□□□□ 0.25
MTHFRP42898 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.63■□□□□ 0.25
MTHFRP42898 AC124283.3-201ENST00000570869 594 ntBASIC16.63■□□□□ 0.25
MTHFRP42898 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.63■□□□□ 0.25
MTHFRP42898 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.63■□□□□ 0.25
MTHFRP42898 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.63■□□□□ 0.25
MTHFRP42898 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.63■□□□□ 0.25
MTHFRP42898 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.63■□□□□ 0.25
MTHFRP42898 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
MTHFRP42898 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MTHFRP42898 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MTHFRP42898 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MTHFRP42898 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MTHFRP42898 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MTHFRP42898 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MTHFRP42898 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
MTHFRP42898 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.63■□□□□ 0.25
MTHFRP42898 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.63■□□□□ 0.25
MTHFRP42898 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFRP42898 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFRP42898 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFRP42898 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFRP42898 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.62■□□□□ 0.25
MTHFRP42898 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
MTHFRP42898 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFRP42898 AC008894.3-201ENST00000624324 3103 ntBASIC16.62■□□□□ 0.25
MTHFRP42898 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFRP42898 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.62■□□□□ 0.25
MTHFRP42898 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.62■□□□□ 0.25
MTHFRP42898 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MTHFRP42898 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFRP42898 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFRP42898 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.62■□□□□ 0.25
MTHFRP42898 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFRP42898 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFRP42898 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
MTHFRP42898 BAATP1-201ENST00000412284 1225 ntBASIC16.62■□□□□ 0.25
MTHFRP42898 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.62■□□□□ 0.25
MTHFRP42898 AC016694.1-201ENST00000434179 700 ntBASIC16.62■□□□□ 0.25
MTHFRP42898 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
MTHFRP42898 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFRP42898 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MTHFRP42898 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.62■□□□□ 0.25
MTHFRP42898 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.62■□□□□ 0.25
MTHFRP42898 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.62■□□□□ 0.25
MTHFRP42898 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MTHFRP42898 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms