Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
APOBEC1P41238 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
APOBEC1P41238 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.42□□□□□ -0.1
APOBEC1P41238 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.42□□□□□ -0.1
APOBEC1P41238 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.42□□□□□ -0.1
APOBEC1P41238 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
APOBEC1P41238 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.42□□□□□ -0.1
APOBEC1P41238 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.42□□□□□ -0.1
APOBEC1P41238 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
APOBEC1P41238 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.42□□□□□ -0.1
APOBEC1P41238 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOBEC1P41238 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.41□□□□□ -0.1
APOBEC1P41238 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
APOBEC1P41238 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.41□□□□□ -0.1
APOBEC1P41238 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 PRAL-201ENST00000624952 3286 ntBASIC14.41□□□□□ -0.1
APOBEC1P41238 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.41□□□□□ -0.1
APOBEC1P41238 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.41□□□□□ -0.1
APOBEC1P41238 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.41□□□□□ -0.1
APOBEC1P41238 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.41□□□□□ -0.1
APOBEC1P41238 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.41□□□□□ -0.1
APOBEC1P41238 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.41□□□□□ -0.1
APOBEC1P41238 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.41□□□□□ -0.1
APOBEC1P41238 AC073592.8-201ENST00000624126 511 ntBASIC14.41□□□□□ -0.1
APOBEC1P41238 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
APOBEC1P41238 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.41□□□□□ -0.1
APOBEC1P41238 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
APOBEC1P41238 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
APOBEC1P41238 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
APOBEC1P41238 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.41□□□□□ -0.1
APOBEC1P41238 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
APOBEC1P41238 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.41□□□□□ -0.1
APOBEC1P41238 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
APOBEC1P41238 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
APOBEC1P41238 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
APOBEC1P41238 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
APOBEC1P41238 FLJ16779-201ENST00000612722 7638 ntBASIC14.4□□□□□ -0.1
APOBEC1P41238 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
APOBEC1P41238 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.4□□□□□ -0.1
APOBEC1P41238 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
APOBEC1P41238 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
APOBEC1P41238 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
APOBEC1P41238 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
APOBEC1P41238 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
APOBEC1P41238 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.4□□□□□ -0.1
APOBEC1P41238 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 AZGP1P1-201ENST00000411909 902 ntBASIC14.4□□□□□ -0.1
APOBEC1P41238 RPL37AP1-201ENST00000412502 279 ntBASIC14.4□□□□□ -0.1
APOBEC1P41238 AL080243.2-201ENST00000418783 582 ntBASIC14.4□□□□□ -0.1
APOBEC1P41238 AL645939.2-201ENST00000427340 991 ntBASIC14.4□□□□□ -0.1
APOBEC1P41238 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.4□□□□□ -0.1
APOBEC1P41238 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.4□□□□□ -0.1
APOBEC1P41238 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.4□□□□□ -0.1
APOBEC1P41238 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.4□□□□□ -0.1
APOBEC1P41238 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.4□□□□□ -0.1
APOBEC1P41238 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.4□□□□□ -0.1
APOBEC1P41238 AL158211.3-201ENST00000607385 239 ntBASIC14.4□□□□□ -0.1
APOBEC1P41238 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
APOBEC1P41238 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms