Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC23.38■■□□□ 1.33
KDM5CP41229 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
KDM5CP41229 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
KDM5CP41229 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC23.38■■□□□ 1.33
KDM5CP41229 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
KDM5CP41229 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
KDM5CP41229 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC23.38■■□□□ 1.33
KDM5CP41229 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC23.38■■□□□ 1.33
KDM5CP41229 MIR5572-201ENST00000583188 137 ntBASIC23.38■■□□□ 1.33
KDM5CP41229 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
KDM5CP41229 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC23.38■■□□□ 1.33
KDM5CP41229 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KDM5CP41229 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
KDM5CP41229 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
KDM5CP41229 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
KDM5CP41229 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
KDM5CP41229 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
KDM5CP41229 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC23.37■■□□□ 1.33
KDM5CP41229 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC23.37■■□□□ 1.33
KDM5CP41229 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC23.37■■□□□ 1.33
KDM5CP41229 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC23.37■■□□□ 1.33
KDM5CP41229 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC23.37■■□□□ 1.33
KDM5CP41229 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC23.37■■□□□ 1.33
KDM5CP41229 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC23.37■■□□□ 1.33
KDM5CP41229 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
KDM5CP41229 PRSS30P-206ENST00000641773 873 ntBASIC23.37■■□□□ 1.33
KDM5CP41229 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
KDM5CP41229 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
KDM5CP41229 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC23.37■■□□□ 1.33
KDM5CP41229 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
KDM5CP41229 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC23.37■■□□□ 1.33
KDM5CP41229 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC23.37■■□□□ 1.33
KDM5CP41229 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
KDM5CP41229 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC23.37■■□□□ 1.33
KDM5CP41229 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
KDM5CP41229 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
KDM5CP41229 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
KDM5CP41229 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KDM5CP41229 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.36■■□□□ 1.33
KDM5CP41229 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KDM5CP41229 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KDM5CP41229 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
KDM5CP41229 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KDM5CP41229 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
KDM5CP41229 RPL17P11-201ENST00000417593 544 ntBASIC23.36■■□□□ 1.33
KDM5CP41229 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC23.36■■□□□ 1.33
KDM5CP41229 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC23.36■■□□□ 1.33
KDM5CP41229 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
KDM5CP41229 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC23.36■■□□□ 1.33
KDM5CP41229 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC23.36■■□□□ 1.33
KDM5CP41229 AC079336.7-201ENST00000623428 1078 ntBASIC23.36■■□□□ 1.33
KDM5CP41229 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KDM5CP41229 AC008132.1-202ENST00000342005 1389 ntBASIC23.36■■□□□ 1.33
KDM5CP41229 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KDM5CP41229 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KDM5CP41229 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KDM5CP41229 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC23.36■■□□□ 1.33
KDM5CP41229 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KDM5CP41229 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
KDM5CP41229 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
KDM5CP41229 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC23.35■■□□□ 1.33
KDM5CP41229 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC23.35■■□□□ 1.33
KDM5CP41229 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC23.35■■□□□ 1.33
KDM5CP41229 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC23.35■■□□□ 1.33
KDM5CP41229 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC23.35■■□□□ 1.33
KDM5CP41229 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC23.35■■□□□ 1.33
KDM5CP41229 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC23.35■■□□□ 1.33
KDM5CP41229 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC23.35■■□□□ 1.33
KDM5CP41229 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
KDM5CP41229 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
KDM5CP41229 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC23.35■■□□□ 1.33
KDM5CP41229 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
KDM5CP41229 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC23.35■■□□□ 1.33
KDM5CP41229 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC23.35■■□□□ 1.33
KDM5CP41229 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
KDM5CP41229 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
KDM5CP41229 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC23.35■■□□□ 1.33
KDM5CP41229 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC23.35■■□□□ 1.33
KDM5CP41229 AC106820.2-201ENST00000563775 3264 ntBASIC23.35■■□□□ 1.33
KDM5CP41229 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC23.35■■□□□ 1.33
KDM5CP41229 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
KDM5CP41229 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC23.35■■□□□ 1.33
KDM5CP41229 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC23.35■■□□□ 1.33
KDM5CP41229 EHF-205ENST00000527935 557 ntTSL 2 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms