Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 HCG4-201ENST00000418983 998 ntBASIC13.21□□□□□ -0.29
SNCAP37840 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.21□□□□□ -0.29
SNCAP37840 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.21□□□□□ -0.29
SNCAP37840 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
SNCAP37840 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.21□□□□□ -0.29
SNCAP37840 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.21□□□□□ -0.29
SNCAP37840 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.21□□□□□ -0.29
SNCAP37840 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.21□□□□□ -0.29
SNCAP37840 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.21□□□□□ -0.29
SNCAP37840 PRELID1P1-202ENST00000567272 903 ntBASIC13.21□□□□□ -0.29
SNCAP37840 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.21□□□□□ -0.29
SNCAP37840 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.21□□□□□ -0.29
SNCAP37840 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.21□□□□□ -0.29
SNCAP37840 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.21□□□□□ -0.29
SNCAP37840 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.21□□□□□ -0.29
SNCAP37840 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SNCAP37840 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SNCAP37840 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.21□□□□□ -0.3
SNCAP37840 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SNCAP37840 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.3
SNCAP37840 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
SNCAP37840 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SNCAP37840 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SNCAP37840 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SNCAP37840 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SNCAP37840 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.21□□□□□ -0.3
SNCAP37840 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SNCAP37840 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.21□□□□□ -0.3
SNCAP37840 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SNCAP37840 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SNCAP37840 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
SNCAP37840 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SNCAP37840 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.2□□□□□ -0.3
SNCAP37840 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.2□□□□□ -0.3
SNCAP37840 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.2□□□□□ -0.3
SNCAP37840 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.2□□□□□ -0.3
SNCAP37840 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.2□□□□□ -0.3
SNCAP37840 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SNCAP37840 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.2□□□□□ -0.3
SNCAP37840 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
SNCAP37840 LAGE3P1-201ENST00000425356 484 ntBASIC13.2□□□□□ -0.3
SNCAP37840 UPK3BP1-201ENST00000428678 509 ntBASIC13.2□□□□□ -0.3
SNCAP37840 HCG4P8-203ENST00000443049 980 ntBASIC13.2□□□□□ -0.3
SNCAP37840 FGFR3P6-201ENST00000457012 610 ntBASIC13.2□□□□□ -0.3
SNCAP37840 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.2□□□□□ -0.3
SNCAP37840 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.2□□□□□ -0.3
SNCAP37840 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.2□□□□□ -0.3
SNCAP37840 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.2□□□□□ -0.3
SNCAP37840 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.2□□□□□ -0.3
SNCAP37840 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
SNCAP37840 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.2□□□□□ -0.3
SNCAP37840 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SNCAP37840 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SNCAP37840 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SNCAP37840 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SNCAP37840 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.2□□□□□ -0.3
SNCAP37840 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 LINC00552-201ENST00000625151 2579 ntBASIC13.2□□□□□ -0.3
SNCAP37840 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SNCAP37840 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNCAP37840 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SNCAP37840 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.19□□□□□ -0.3
SNCAP37840 AC005840.4-201ENST00000541242 2494 ntBASIC13.19□□□□□ -0.3
SNCAP37840 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.19□□□□□ -0.3
SNCAP37840 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SNCAP37840 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
SNCAP37840 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms