Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.68□□□□□ -0.06
SHC1P29353 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SHC1P29353 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.68□□□□□ -0.06
SHC1P29353 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SHC1P29353 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.68□□□□□ -0.06
SHC1P29353 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHC1P29353 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.68□□□□□ -0.06
SHC1P29353 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SHC1P29353 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
SHC1P29353 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SHC1P29353 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.67□□□□□ -0.06
SHC1P29353 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.67□□□□□ -0.06
SHC1P29353 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.67□□□□□ -0.06
SHC1P29353 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SHC1P29353 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
SHC1P29353 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.67□□□□□ -0.06
SHC1P29353 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.67□□□□□ -0.06
SHC1P29353 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 HLA-J-203ENST00000494367 1087 ntBASIC14.67□□□□□ -0.06
SHC1P29353 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.67□□□□□ -0.06
SHC1P29353 RNA5SP410-201ENST00000516285 106 ntBASIC14.67□□□□□ -0.06
SHC1P29353 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.67□□□□□ -0.06
SHC1P29353 RARRES2P9-201ENST00000565168 469 ntBASIC14.67□□□□□ -0.06
SHC1P29353 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.67□□□□□ -0.06
SHC1P29353 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.67□□□□□ -0.06
SHC1P29353 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.67□□□□□ -0.06
SHC1P29353 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
SHC1P29353 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.67□□□□□ -0.06
SHC1P29353 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SHC1P29353 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SHC1P29353 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SHC1P29353 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.67□□□□□ -0.06
SHC1P29353 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.67□□□□□ -0.06
SHC1P29353 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SHC1P29353 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.67□□□□□ -0.06
SHC1P29353 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.67□□□□□ -0.06
SHC1P29353 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SHC1P29353 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.66□□□□□ -0.06
SHC1P29353 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.66□□□□□ -0.06
SHC1P29353 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.66□□□□□ -0.06
SHC1P29353 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SHC1P29353 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SHC1P29353 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.66□□□□□ -0.06
SHC1P29353 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.66□□□□□ -0.06
SHC1P29353 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SHC1P29353 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
SHC1P29353 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SHC1P29353 FAM220BP-201ENST00000377689 816 ntBASIC14.66□□□□□ -0.06
SHC1P29353 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SHC1P29353 HLA-H-201ENST00000383620 1096 ntBASIC14.66□□□□□ -0.06
SHC1P29353 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.66□□□□□ -0.06
SHC1P29353 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.66□□□□□ -0.06
SHC1P29353 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.66□□□□□ -0.06
SHC1P29353 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.66□□□□□ -0.06
SHC1P29353 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SHC1P29353 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.66□□□□□ -0.06
SHC1P29353 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.66□□□□□ -0.06
SHC1P29353 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.66□□□□□ -0.06
SHC1P29353 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
SHC1P29353 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.66□□□□□ -0.06
SHC1P29353 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.66□□□□□ -0.06
SHC1P29353 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
SHC1P29353 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SHC1P29353 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SHC1P29353 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHC1P29353 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms