Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.77■□□□□ 0.12
VARSP26640 AC027612.4-201ENST00000605371 583 ntBASIC15.77■□□□□ 0.12
VARSP26640 AC006213.4-201ENST00000616184 634 ntBASIC15.77■□□□□ 0.12
VARSP26640 AL513210.1-201ENST00000629608 234 ntBASIC15.77■□□□□ 0.12
VARSP26640 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
VARSP26640 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
VARSP26640 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
VARSP26640 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.77■□□□□ 0.11
VARSP26640 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
VARSP26640 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.77■□□□□ 0.11
VARSP26640 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.77■□□□□ 0.11
VARSP26640 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VARSP26640 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
VARSP26640 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
VARSP26640 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.77■□□□□ 0.11
VARSP26640 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VARSP26640 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.77■□□□□ 0.11
VARSP26640 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VARSP26640 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.77■□□□□ 0.11
VARSP26640 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.77■□□□□ 0.11
VARSP26640 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
VARSP26640 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 AC138035.3-201ENST00000622706 2791 ntBASIC15.76■□□□□ 0.11
VARSP26640 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VARSP26640 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.76■□□□□ 0.11
VARSP26640 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.76■□□□□ 0.11
VARSP26640 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.76■□□□□ 0.11
VARSP26640 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.76■□□□□ 0.11
VARSP26640 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.76■□□□□ 0.11
VARSP26640 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.76■□□□□ 0.11
VARSP26640 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.76■□□□□ 0.11
VARSP26640 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.76■□□□□ 0.11
VARSP26640 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
VARSP26640 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
VARSP26640 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VARSP26640 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.76■□□□□ 0.11
VARSP26640 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 AC093028.1-201ENST00000622998 982 ntBASIC15.76■□□□□ 0.11
VARSP26640 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.76■□□□□ 0.11
VARSP26640 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.76■□□□□ 0.11
VARSP26640 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.76■□□□□ 0.11
VARSP26640 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.76■□□□□ 0.11
VARSP26640 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.76■□□□□ 0.11
VARSP26640 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.76■□□□□ 0.11
VARSP26640 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VARSP26640 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.76■□□□□ 0.11
VARSP26640 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
VARSP26640 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VARSP26640 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
VARSP26640 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
VARSP26640 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
VARSP26640 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
VARSP26640 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.75■□□□□ 0.11
VARSP26640 AC069224.1-201ENST00000566372 1715 ntBASIC15.75■□□□□ 0.11
VARSP26640 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
VARSP26640 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
VARSP26640 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.75■□□□□ 0.11
VARSP26640 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 MIR648-201ENST00000385046 94 ntBASIC15.75■□□□□ 0.11
VARSP26640 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.75■□□□□ 0.11
VARSP26640 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VARSP26640 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.75■□□□□ 0.11
VARSP26640 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.75■□□□□ 0.11
VARSP26640 FAM86GP-201ENST00000448322 971 ntBASIC15.75■□□□□ 0.11
VARSP26640 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
VARSP26640 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.75■□□□□ 0.11
VARSP26640 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.75■□□□□ 0.11
VARSP26640 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.75■□□□□ 0.11
VARSP26640 KRT8P48-201ENST00000515599 1220 ntBASIC15.75■□□□□ 0.11
VARSP26640 AC190387.1-201ENST00000551683 408 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms