Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.48□□□□□ -0.25
COL8A2P25067 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC13.48□□□□□ -0.25
COL8A2P25067 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
COL8A2P25067 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
COL8A2P25067 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
COL8A2P25067 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
COL8A2P25067 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.48□□□□□ -0.25
COL8A2P25067 AP002414.2-201ENST00000591780 3365 ntBASIC13.48□□□□□ -0.25
COL8A2P25067 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 KRT8P37-201ENST00000451609 1420 ntBASIC13.47□□□□□ -0.25
COL8A2P25067 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.47□□□□□ -0.25
COL8A2P25067 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
COL8A2P25067 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
COL8A2P25067 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
COL8A2P25067 AC006449.6-201ENST00000612330 2296 ntBASIC13.47□□□□□ -0.25
COL8A2P25067 AC063926.2-201ENST00000623766 1308 ntBASIC13.47□□□□□ -0.25
COL8A2P25067 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.47□□□□□ -0.25
COL8A2P25067 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.47□□□□□ -0.25
COL8A2P25067 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.47□□□□□ -0.25
COL8A2P25067 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.47□□□□□ -0.25
COL8A2P25067 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 AZGP1P1-201ENST00000411909 902 ntBASIC13.47□□□□□ -0.25
COL8A2P25067 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.47□□□□□ -0.25
COL8A2P25067 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.47□□□□□ -0.25
COL8A2P25067 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
COL8A2P25067 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.47□□□□□ -0.25
COL8A2P25067 TP53TG3HP-202ENST00000569755 579 ntBASIC13.47□□□□□ -0.25
COL8A2P25067 AC025048.3-201ENST00000590609 569 ntBASIC13.47□□□□□ -0.25
COL8A2P25067 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 CHCHD2P3-201ENST00000603038 451 ntBASIC13.47□□□□□ -0.25
COL8A2P25067 AC005702.4-201ENST00000618393 416 ntBASIC13.47□□□□□ -0.25
COL8A2P25067 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
COL8A2P25067 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.47□□□□□ -0.25
COL8A2P25067 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.47□□□□□ -0.25
COL8A2P25067 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
COL8A2P25067 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.47□□□□□ -0.25
COL8A2P25067 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL8A2P25067 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.46□□□□□ -0.25
COL8A2P25067 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
COL8A2P25067 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
COL8A2P25067 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.46□□□□□ -0.25
COL8A2P25067 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.46□□□□□ -0.25
COL8A2P25067 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.46□□□□□ -0.25
COL8A2P25067 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.46□□□□□ -0.25
COL8A2P25067 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.46□□□□□ -0.25
COL8A2P25067 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.46□□□□□ -0.25
COL8A2P25067 HAUS4P1-201ENST00000406739 1145 ntBASIC13.46□□□□□ -0.25
COL8A2P25067 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.46□□□□□ -0.25
COL8A2P25067 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.46□□□□□ -0.25
COL8A2P25067 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.46□□□□□ -0.25
COL8A2P25067 AL596325.1-201ENST00000563991 1082 ntBASIC13.46□□□□□ -0.25
COL8A2P25067 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.46□□□□□ -0.25
COL8A2P25067 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL8A2P25067 AC012645.4-201ENST00000610691 1061 ntBASIC13.46□□□□□ -0.25
COL8A2P25067 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms