Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.69□□□□□ -0.22
TNFSF4P23510 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TNFSF4P23510 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.69□□□□□ -0.22
TNFSF4P23510 AL596087.1-201ENST00000400979 1969 ntBASIC13.69□□□□□ -0.22
TNFSF4P23510 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.69□□□□□ -0.22
TNFSF4P23510 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TNFSF4P23510 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TNFSF4P23510 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 BASP1P1-201ENST00000430708 665 ntBASIC13.69□□□□□ -0.22
TNFSF4P23510 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.69□□□□□ -0.22
TNFSF4P23510 AL512638.1-201ENST00000457493 794 ntBASIC13.69□□□□□ -0.22
TNFSF4P23510 HLA-V-204ENST00000476601 1289 ntBASIC13.69□□□□□ -0.22
TNFSF4P23510 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.69□□□□□ -0.22
TNFSF4P23510 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.69□□□□□ -0.22
TNFSF4P23510 AC027796.2-201ENST00000575326 344 ntBASIC13.69□□□□□ -0.22
TNFSF4P23510 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.69□□□□□ -0.22
TNFSF4P23510 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.69□□□□□ -0.22
TNFSF4P23510 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.69□□□□□ -0.22
TNFSF4P23510 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.69□□□□□ -0.22
TNFSF4P23510 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
TNFSF4P23510 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.69□□□□□ -0.22
TNFSF4P23510 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.69□□□□□ -0.22
TNFSF4P23510 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 FO538757.1-201ENST00000623083 1397 ntBASIC13.69□□□□□ -0.22
TNFSF4P23510 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.69□□□□□ -0.22
TNFSF4P23510 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TNFSF4P23510 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TNFSF4P23510 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TNFSF4P23510 AC092364.2-201ENST00000596710 2692 ntBASIC13.68□□□□□ -0.22
TNFSF4P23510 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.68□□□□□ -0.22
TNFSF4P23510 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TNFSF4P23510 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.68□□□□□ -0.22
TNFSF4P23510 RNA5SP421-201ENST00000516864 134 ntBASIC13.68□□□□□ -0.22
TNFSF4P23510 AC027369.6-201ENST00000525520 931 ntBASIC13.68□□□□□ -0.22
TNFSF4P23510 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.68□□□□□ -0.22
TNFSF4P23510 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.68□□□□□ -0.22
TNFSF4P23510 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.68□□□□□ -0.22
TNFSF4P23510 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TNFSF4P23510 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TNFSF4P23510 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TNFSF4P23510 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.68□□□□□ -0.22
TNFSF4P23510 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
TNFSF4P23510 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
TNFSF4P23510 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TNFSF4P23510 AL662844.4-201ENST00000606367 2838 ntBASIC13.68□□□□□ -0.22
TNFSF4P23510 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.67□□□□□ -0.22
TNFSF4P23510 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.67□□□□□ -0.22
TNFSF4P23510 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TNFSF4P23510 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms