Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC2P18074 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC2P18074 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC2P18074 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.4■□□□□ 0.22
ERCC2P18074 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
ERCC2P18074 AC092183.1-201ENST00000469884 875 ntBASIC16.4■□□□□ 0.22
ERCC2P18074 HLA-V-204ENST00000476601 1289 ntBASIC16.4■□□□□ 0.22
ERCC2P18074 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.4■□□□□ 0.22
ERCC2P18074 AC069120.2-201ENST00000524091 540 ntBASIC16.4■□□□□ 0.22
ERCC2P18074 HNRNPUP1-201ENST00000554987 333 ntBASIC16.4■□□□□ 0.22
ERCC2P18074 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.4■□□□□ 0.22
ERCC2P18074 AL138828.2-201ENST00000615812 383 ntBASIC16.4■□□□□ 0.22
ERCC2P18074 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ERCC2P18074 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.4■□□□□ 0.22
ERCC2P18074 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
ERCC2P18074 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC2P18074 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.4■□□□□ 0.22
ERCC2P18074 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.4■□□□□ 0.22
ERCC2P18074 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
ERCC2P18074 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC2P18074 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC2P18074 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC2P18074 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC2P18074 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC2P18074 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.4■□□□□ 0.22
ERCC2P18074 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ERCC2P18074 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ERCC2P18074 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
ERCC2P18074 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
ERCC2P18074 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
ERCC2P18074 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.39■□□□□ 0.22
ERCC2P18074 FO538757.1-201ENST00000623083 1397 ntBASIC16.39■□□□□ 0.21
ERCC2P18074 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC2P18074 AL139384.1-201ENST00000612143 3047 ntBASIC16.39■□□□□ 0.21
ERCC2P18074 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC2P18074 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC2P18074 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC2P18074 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC2P18074 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.39■□□□□ 0.21
ERCC2P18074 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC2P18074 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC2P18074 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ERCC2P18074 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.39■□□□□ 0.21
ERCC2P18074 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.39■□□□□ 0.21
ERCC2P18074 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC2P18074 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.39■□□□□ 0.21
ERCC2P18074 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.39■□□□□ 0.21
ERCC2P18074 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC2P18074 AC097359.3-201ENST00000603982 1210 ntBASIC16.39■□□□□ 0.21
ERCC2P18074 AC073592.8-201ENST00000624126 511 ntBASIC16.39■□□□□ 0.21
ERCC2P18074 AC046158.3-201ENST00000624947 2558 ntBASIC16.39■□□□□ 0.21
ERCC2P18074 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.39■□□□□ 0.21
ERCC2P18074 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC2P18074 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
ERCC2P18074 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.39■□□□□ 0.21
ERCC2P18074 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ERCC2P18074 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ERCC2P18074 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
ERCC2P18074 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
ERCC2P18074 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ERCC2P18074 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ERCC2P18074 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.38■□□□□ 0.21
ERCC2P18074 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.38■□□□□ 0.21
ERCC2P18074 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ERCC2P18074 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ERCC2P18074 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 AC092850.2-201ENST00000623821 2697 ntBASIC16.38■□□□□ 0.21
ERCC2P18074 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.38■□□□□ 0.21
ERCC2P18074 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
ERCC2P18074 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.38■□□□□ 0.21
ERCC2P18074 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
ERCC2P18074 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.38■□□□□ 0.21
ERCC2P18074 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.38■□□□□ 0.21
ERCC2P18074 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.38■□□□□ 0.21
ERCC2P18074 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.38■□□□□ 0.21
ERCC2P18074 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
ERCC2P18074 TEX28P1-201ENST00000613479 1221 ntBASIC16.38■□□□□ 0.21
ERCC2P18074 TEX28P2-201ENST00000617764 1221 ntBASIC16.38■□□□□ 0.21
ERCC2P18074 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
ERCC2P18074 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
ERCC2P18074 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
ERCC2P18074 AC092127.1-201ENST00000567093 3455 ntBASIC16.38■□□□□ 0.21
ERCC2P18074 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.38■□□□□ 0.21
ERCC2P18074 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
ERCC2P18074 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.38■□□□□ 0.21
ERCC2P18074 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
ERCC2P18074 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms