Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SYN1P17600 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 TUBBP5-203ENST00000508529 1334 ntBASIC17.15■□□□□ 0.34
SYN1P17600 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SYN1P17600 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYN1P17600 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SYN1P17600 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
SYN1P17600 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.14■□□□□ 0.33
SYN1P17600 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
SYN1P17600 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYN1P17600 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.14■□□□□ 0.33
SYN1P17600 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.14■□□□□ 0.33
SYN1P17600 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.14■□□□□ 0.33
SYN1P17600 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYN1P17600 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.14■□□□□ 0.33
SYN1P17600 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYN1P17600 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYN1P17600 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.14■□□□□ 0.33
SYN1P17600 LINC01144-201ENST00000626198 1710 ntBASIC17.14■□□□□ 0.33
SYN1P17600 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYN1P17600 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SYN1P17600 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYN1P17600 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYN1P17600 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
SYN1P17600 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYN1P17600 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.14■□□□□ 0.33
SYN1P17600 AC007274.2-201ENST00000421675 662 ntBASIC17.14■□□□□ 0.33
SYN1P17600 AL596276.2-201ENST00000447525 331 ntBASIC17.14■□□□□ 0.33
SYN1P17600 AC015910.1-201ENST00000579400 975 ntBASIC17.14■□□□□ 0.33
SYN1P17600 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.14■□□□□ 0.33
SYN1P17600 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.14■□□□□ 0.33
SYN1P17600 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC17.14■□□□□ 0.33
SYN1P17600 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.14■□□□□ 0.33
SYN1P17600 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
SYN1P17600 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.14■□□□□ 0.33
SYN1P17600 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYN1P17600 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYN1P17600 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYN1P17600 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.14■□□□□ 0.33
SYN1P17600 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYN1P17600 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYN1P17600 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SYN1P17600 AL603756.1-201ENST00000606511 2163 ntBASIC17.13■□□□□ 0.33
SYN1P17600 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SYN1P17600 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.13■□□□□ 0.33
SYN1P17600 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.13■□□□□ 0.33
SYN1P17600 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.13■□□□□ 0.33
SYN1P17600 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
SYN1P17600 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYN1P17600 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYN1P17600 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.13■□□□□ 0.33
SYN1P17600 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SYN1P17600 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYN1P17600 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.13■□□□□ 0.33
SYN1P17600 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYN1P17600 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYN1P17600 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SYN1P17600 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC17.13■□□□□ 0.33
SYN1P17600 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.13■□□□□ 0.33
SYN1P17600 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SYN1P17600 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.13■□□□□ 0.33
SYN1P17600 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.13■□□□□ 0.33
SYN1P17600 ACTG1P2-201ENST00000415776 1125 ntBASIC17.13■□□□□ 0.33
SYN1P17600 CD8B2-202ENST00000417670 633 ntBASIC17.13■□□□□ 0.33
SYN1P17600 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.13■□□□□ 0.33
SYN1P17600 ACTG1P11-201ENST00000425411 1125 ntBASIC17.13■□□□□ 0.33
SYN1P17600 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SYN1P17600 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SYN1P17600 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.13■□□□□ 0.33
SYN1P17600 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.13■□□□□ 0.33
SYN1P17600 RN7SL736P-201ENST00000613111 269 ntBASIC17.13■□□□□ 0.33
SYN1P17600 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.13■□□□□ 0.33
SYN1P17600 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYN1P17600 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYN1P17600 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
SYN1P17600 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYN1P17600 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SYN1P17600 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYN1P17600 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.13■□□□□ 0.33
SYN1P17600 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYN1P17600 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
SYN1P17600 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.12■□□□□ 0.33
SYN1P17600 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.12■□□□□ 0.33
SYN1P17600 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.12■□□□□ 0.33
SYN1P17600 AC024681.1-201ENST00000521917 487 ntBASIC17.12■□□□□ 0.33
SYN1P17600 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
SYN1P17600 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SYN1P17600 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms