Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AL356488.2-201ENST00000602755 427 ntBASIC15.13■□□□□ 0.01
NCK1P16333 MIR1199-201ENST00000621445 119 ntBASIC15.13■□□□□ 0.01
NCK1P16333 AC018892.3-201ENST00000623986 2499 ntBASIC15.13■□□□□ 0.01
NCK1P16333 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.13■□□□□ 0.01
NCK1P16333 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.13■□□□□ 0.01
NCK1P16333 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NCK1P16333 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NCK1P16333 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
NCK1P16333 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.13■□□□□ 0.01
NCK1P16333 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCK1P16333 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCK1P16333 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCK1P16333 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCK1P16333 AP002414.3-201ENST00000589352 1468 ntBASIC15.13■□□□□ 0.01
NCK1P16333 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCK1P16333 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCK1P16333 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NCK1P16333 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
NCK1P16333 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.12■□□□□ 0.01
NCK1P16333 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.12■□□□□ 0.01
NCK1P16333 LINC00528-201ENST00000600723 2160 ntBASIC15.12■□□□□ 0.01
NCK1P16333 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NCK1P16333 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NCK1P16333 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NCK1P16333 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.12■□□□□ 0.01
NCK1P16333 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NCK1P16333 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.12■□□□□ 0.01
NCK1P16333 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.12■□□□□ 0.01
NCK1P16333 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NCK1P16333 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.12■□□□□ 0.01
NCK1P16333 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.12■□□□□ 0.01
NCK1P16333 AC245100.5-201ENST00000452108 331 ntBASIC15.12■□□□□ 0.01
NCK1P16333 SAPCD2P3-201ENST00000455031 850 ntBASIC15.12■□□□□ 0.01
NCK1P16333 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.12■□□□□ 0.01
NCK1P16333 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NCK1P16333 MIR3909-201ENST00000579518 119 ntBASIC15.12■□□□□ 0.01
NCK1P16333 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
NCK1P16333 AL365330.1-201ENST00000607459 531 ntBASIC15.12■□□□□ 0.01
NCK1P16333 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.12■□□□□ 0.01
NCK1P16333 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 AC007292.2-201ENST00000593524 1812 ntBASIC15.12■□□□□ 0.01
NCK1P16333 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.12■□□□□ 0.01
NCK1P16333 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.12■□□□□ 0.01
NCK1P16333 LINC01101-201ENST00000622953 1884 ntBASIC15.12■□□□□ 0.01
NCK1P16333 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 PCDHA3-202ENST00000532566 4594 ntBASIC15.12■□□□□ 0.01
NCK1P16333 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.12■□□□□ 0.01
NCK1P16333 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NCK1P16333 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.12■□□□□ 0.01
NCK1P16333 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.11■□□□□ 0.01
NCK1P16333 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NCK1P16333 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NCK1P16333 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.11■□□□□ 0.01
NCK1P16333 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.11■□□□□ 0.01
NCK1P16333 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NCK1P16333 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
NCK1P16333 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.11■□□□□ 0.01
NCK1P16333 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.11■□□□□ 0.01
NCK1P16333 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.11■□□□□ 0.01
NCK1P16333 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.11■□□□□ 0.01
NCK1P16333 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NCK1P16333 AL513480.1-201ENST00000451731 511 ntBASIC15.11■□□□□ 0.01
NCK1P16333 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.11■□□□□ 0.01
NCK1P16333 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.11■□□□□ 0.01
NCK1P16333 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.11■□□□□ 0.01
NCK1P16333 CXCL1P1-201ENST00000502804 216 ntBASIC15.11■□□□□ 0.01
NCK1P16333 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NCK1P16333 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.11■□□□□ 0.01
NCK1P16333 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.11■□□□□ 0.01
NCK1P16333 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms