Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
THRAP10827 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THRAP10827 AL031731.1-201ENST00000642131 2094 ntBASIC16.08■□□□□ 0.16
THRAP10827 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.08■□□□□ 0.16
THRAP10827 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THRAP10827 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
THRAP10827 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THRAP10827 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
THRAP10827 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.08■□□□□ 0.16
THRAP10827 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
THRAP10827 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.08■□□□□ 0.16
THRAP10827 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
THRAP10827 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.08■□□□□ 0.16
THRAP10827 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.08■□□□□ 0.16
THRAP10827 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.08■□□□□ 0.16
THRAP10827 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.08■□□□□ 0.16
THRAP10827 DUX4L27-201ENST00000554796 1261 ntBASIC16.08■□□□□ 0.16
THRAP10827 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.08■□□□□ 0.16
THRAP10827 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.08■□□□□ 0.16
THRAP10827 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.08■□□□□ 0.16
THRAP10827 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.08■□□□□ 0.16
THRAP10827 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
THRAP10827 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THRAP10827 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THRAP10827 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
THRAP10827 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.08■□□□□ 0.16
THRAP10827 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.08■□□□□ 0.16
THRAP10827 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THRAP10827 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
THRAP10827 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.08■□□□□ 0.16
THRAP10827 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
THRAP10827 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
THRAP10827 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
THRAP10827 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.07■□□□□ 0.16
THRAP10827 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.07■□□□□ 0.16
THRAP10827 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.07■□□□□ 0.16
THRAP10827 SPDYE14P-201ENST00000442619 822 ntBASIC16.07■□□□□ 0.16
THRAP10827 AC026150.2-201ENST00000564693 1156 ntBASIC16.07■□□□□ 0.16
THRAP10827 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
THRAP10827 AC008267.7-201ENST00000624570 1194 ntBASIC16.07■□□□□ 0.16
THRAP10827 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.07■□□□□ 0.16
THRAP10827 TUBB3P1-201ENST00000405796 1332 ntBASIC16.07■□□□□ 0.16
THRAP10827 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.07■□□□□ 0.16
THRAP10827 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.07■□□□□ 0.16
THRAP10827 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
THRAP10827 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.06■□□□□ 0.16
THRAP10827 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.06■□□□□ 0.16
THRAP10827 REXO1L8P-201ENST00000604378 1897 ntBASIC16.06■□□□□ 0.16
THRAP10827 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
THRAP10827 LINC01144-201ENST00000626198 1710 ntBASIC16.06■□□□□ 0.16
THRAP10827 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.06■□□□□ 0.16
THRAP10827 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 KRT8P39-201ENST00000396270 1433 ntBASIC16.06■□□□□ 0.16
THRAP10827 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
THRAP10827 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
THRAP10827 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.06■□□□□ 0.16
THRAP10827 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
THRAP10827 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
THRAP10827 KLF2P3-201ENST00000451977 1087 ntBASIC16.06■□□□□ 0.16
THRAP10827 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
THRAP10827 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
THRAP10827 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.06■□□□□ 0.16
THRAP10827 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
THRAP10827 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
THRAP10827 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.06■□□□□ 0.16
THRAP10827 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
THRAP10827 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
THRAP10827 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.06■□□□□ 0.16
THRAP10827 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.06■□□□□ 0.16
THRAP10827 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms