Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSB-PGBD3P0DP91 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.96■□□□□ 0.95
CSB-PGBD3P0DP91 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSB-PGBD3P0DP91 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CSB-PGBD3P0DP91 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CSB-PGBD3P0DP91 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CSB-PGBD3P0DP91 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CSB-PGBD3P0DP91 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CSB-PGBD3P0DP91 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 ACKR1-201ENST00000368121 1240 ntBASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 AC026410.3-201ENST00000514280 936 ntBASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CSB-PGBD3P0DP91 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 CNN2P8-201ENST00000421872 913 ntBASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 AC104306.2-201ENST00000451877 341 ntBASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 AP001258.2-201ENST00000529891 490 ntBASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 AC025279.2-201ENST00000569730 653 ntBASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 AC107373.2-201ENST00000607735 490 ntBASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 DRD5P1-201ENST00000456605 1438 ntBASIC20.94■□□□□ 0.94
CSB-PGBD3P0DP91 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 FAM197Y7-201ENST00000432892 766 ntBASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 KSR1-207ENST00000578981 748 ntTSL 4 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 AC093813.1-201ENST00000605066 256 ntBASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 AC138951.2-201ENST00000623455 1161 ntBASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 PPA1-206ENST00000625364 644 ntTSL 5 BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CSB-PGBD3P0DP91 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms