Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 PMS2P1-201ENST00000431037 1228 ntBASIC14.42□□□□□ -0.1
HLA-DPB1P04440 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 SLC25A1P1-201ENST00000528351 927 ntBASIC14.42□□□□□ -0.1
HLA-DPB1P04440 AC107918.2-201ENST00000530817 355 ntBASIC14.42□□□□□ -0.1
HLA-DPB1P04440 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 CICP13-201ENST00000422015 2789 ntBASIC14.42□□□□□ -0.1
HLA-DPB1P04440 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 TCAF2P1-201ENST00000291129 2421 ntBASIC14.42□□□□□ -0.1
HLA-DPB1P04440 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DPB1P04440 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 CRYGEP-201ENST00000412192 528 ntBASIC14.41□□□□□ -0.1
HLA-DPB1P04440 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 BX640515.1-201ENST00000617215 977 ntBASIC14.41□□□□□ -0.1
HLA-DPB1P04440 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DPB1P04440 AC129492.6-201ENST00000611383 1305 ntBASIC14.41□□□□□ -0.1
HLA-DPB1P04440 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HLA-DPB1P04440 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms