Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.21□□□□□ -0.14
APOC1P02654 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
APOC1P02654 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.2□□□□□ -0.14
APOC1P02654 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.2□□□□□ -0.14
APOC1P02654 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 AC112504.1-201ENST00000623415 1841 ntBASIC14.2□□□□□ -0.14
APOC1P02654 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.2□□□□□ -0.14
APOC1P02654 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.2□□□□□ -0.14
APOC1P02654 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.2□□□□□ -0.14
APOC1P02654 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.2□□□□□ -0.14
APOC1P02654 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
APOC1P02654 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
APOC1P02654 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.2□□□□□ -0.14
APOC1P02654 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.2□□□□□ -0.14
APOC1P02654 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.2□□□□□ -0.14
APOC1P02654 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.2□□□□□ -0.14
APOC1P02654 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.2□□□□□ -0.14
APOC1P02654 AC002347.1-201ENST00000569543 541 ntBASIC14.2□□□□□ -0.14
APOC1P02654 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.2□□□□□ -0.14
APOC1P02654 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.2□□□□□ -0.14
APOC1P02654 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.2□□□□□ -0.14
APOC1P02654 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.2□□□□□ -0.14
APOC1P02654 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.2□□□□□ -0.14
APOC1P02654 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.2□□□□□ -0.14
APOC1P02654 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOC1P02654 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.2□□□□□ -0.14
APOC1P02654 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.19□□□□□ -0.14
APOC1P02654 IL9RP2-201ENST00000423948 1312 ntBASIC14.19□□□□□ -0.14
APOC1P02654 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.19□□□□□ -0.14
APOC1P02654 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
APOC1P02654 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.19□□□□□ -0.14
APOC1P02654 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.19□□□□□ -0.14
APOC1P02654 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.19□□□□□ -0.14
APOC1P02654 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.19□□□□□ -0.14
APOC1P02654 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.19□□□□□ -0.14
APOC1P02654 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
APOC1P02654 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.19□□□□□ -0.14
APOC1P02654 AC018845.2-201ENST00000568326 409 ntBASIC14.19□□□□□ -0.14
APOC1P02654 AC024267.1-201ENST00000582320 895 ntBASIC14.19□□□□□ -0.14
APOC1P02654 MIR4321-201ENST00000592276 80 ntBASIC14.19□□□□□ -0.14
APOC1P02654 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.19□□□□□ -0.14
APOC1P02654 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
APOC1P02654 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.19□□□□□ -0.14
APOC1P02654 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.19□□□□□ -0.14
APOC1P02654 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 AC027601.4-201ENST00000611259 610 ntBASIC14.19□□□□□ -0.14
APOC1P02654 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 FAM197Y3-203ENST00000618346 717 ntBASIC14.19□□□□□ -0.14
APOC1P02654 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
APOC1P02654 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
APOC1P02654 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.19□□□□□ -0.14
APOC1P02654 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.19□□□□□ -0.14
APOC1P02654 AL589702.1-201ENST00000641229 1509 ntBASIC14.19□□□□□ -0.14
APOC1P02654 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
APOC1P02654 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
APOC1P02654 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.19□□□□□ -0.14
APOC1P02654 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
APOC1P02654 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
APOC1P02654 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOC1P02654 AP001282.1-201ENST00000531301 1499 ntBASIC14.18□□□□□ -0.14
APOC1P02654 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.18□□□□□ -0.14
APOC1P02654 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.18□□□□□ -0.14
APOC1P02654 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOC1P02654 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms