Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.67■□□□□ 0.26
BEST1O76090 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.67■□□□□ 0.26
BEST1O76090 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
BEST1O76090 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BEST1O76090 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.67■□□□□ 0.26
BEST1O76090 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.67■□□□□ 0.26
BEST1O76090 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST1O76090 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
BEST1O76090 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
BEST1O76090 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST1O76090 SLC7A15P-201ENST00000424028 1363 ntBASIC16.66■□□□□ 0.26
BEST1O76090 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.66■□□□□ 0.26
BEST1O76090 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST1O76090 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST1O76090 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST1O76090 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST1O76090 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
BEST1O76090 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST1O76090 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST1O76090 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
BEST1O76090 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.66■□□□□ 0.26
BEST1O76090 AL662799.1-202ENST00000614205 422 ntBASIC16.66■□□□□ 0.26
BEST1O76090 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST1O76090 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
BEST1O76090 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 AP005117.1-202ENST00000581724 1908 ntBASIC16.66■□□□□ 0.26
BEST1O76090 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BEST1O76090 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST1O76090 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.66■□□□□ 0.26
BEST1O76090 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST1O76090 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
BEST1O76090 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST1O76090 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
BEST1O76090 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
BEST1O76090 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.65■□□□□ 0.26
BEST1O76090 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
BEST1O76090 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.65■□□□□ 0.26
BEST1O76090 AP005018.1-201ENST00000525475 301 ntBASIC16.65■□□□□ 0.26
BEST1O76090 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.65■□□□□ 0.26
BEST1O76090 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST1O76090 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.65■□□□□ 0.26
BEST1O76090 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.65■□□□□ 0.26
BEST1O76090 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST1O76090 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST1O76090 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
BEST1O76090 CICP13-201ENST00000422015 2789 ntBASIC16.65■□□□□ 0.26
BEST1O76090 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.65■□□□□ 0.26
BEST1O76090 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.64■□□□□ 0.26
BEST1O76090 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BEST1O76090 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
BEST1O76090 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.64■□□□□ 0.25
BEST1O76090 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.64■□□□□ 0.25
BEST1O76090 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BEST1O76090 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
BEST1O76090 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.64■□□□□ 0.25
BEST1O76090 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST1O76090 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST1O76090 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.64■□□□□ 0.25
BEST1O76090 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BEST1O76090 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BEST1O76090 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms