Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRCH4O75427 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.57■□□□□ 0.24
LRCH4O75427 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.57■□□□□ 0.24
LRCH4O75427 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.57■□□□□ 0.24
LRCH4O75427 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
LRCH4O75427 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.57■□□□□ 0.24
LRCH4O75427 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.57■□□□□ 0.24
LRCH4O75427 AL139400.1-201ENST00000366220 510 ntBASIC16.57■□□□□ 0.24
LRCH4O75427 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.57■□□□□ 0.24
LRCH4O75427 MTND6P24-201ENST00000440466 518 ntBASIC16.57■□□□□ 0.24
LRCH4O75427 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.57■□□□□ 0.24
LRCH4O75427 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 AC109322.1-201ENST00000524499 1264 ntBASIC16.57■□□□□ 0.24
LRCH4O75427 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.57■□□□□ 0.24
LRCH4O75427 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.57■□□□□ 0.24
LRCH4O75427 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
LRCH4O75427 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
LRCH4O75427 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRCH4O75427 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LRCH4O75427 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRCH4O75427 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.57■□□□□ 0.24
LRCH4O75427 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.57■□□□□ 0.24
LRCH4O75427 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRCH4O75427 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 AC127383.1-201ENST00000444697 1800 ntBASIC16.56■□□□□ 0.24
LRCH4O75427 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRCH4O75427 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 KRT8P12-202ENST00000472924 1397 ntBASIC16.56■□□□□ 0.24
LRCH4O75427 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
LRCH4O75427 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LRCH4O75427 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.56■□□□□ 0.24
LRCH4O75427 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.56■□□□□ 0.24
LRCH4O75427 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.56■□□□□ 0.24
LRCH4O75427 AC069262.1-201ENST00000539058 672 ntBASIC16.56■□□□□ 0.24
LRCH4O75427 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LRCH4O75427 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.56■□□□□ 0.24
LRCH4O75427 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.56■□□□□ 0.24
LRCH4O75427 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.56■□□□□ 0.24
LRCH4O75427 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.56■□□□□ 0.24
LRCH4O75427 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.56■□□□□ 0.24
LRCH4O75427 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
LRCH4O75427 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.56■□□□□ 0.24
LRCH4O75427 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
LRCH4O75427 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.56■□□□□ 0.24
LRCH4O75427 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRCH4O75427 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.55■□□□□ 0.24
LRCH4O75427 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRCH4O75427 AL607033.1-201ENST00000623900 1599 ntBASIC16.55■□□□□ 0.24
LRCH4O75427 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH4O75427 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.55■□□□□ 0.24
LRCH4O75427 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
LRCH4O75427 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH4O75427 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH4O75427 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
LRCH4O75427 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH4O75427 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH4O75427 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH4O75427 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.55■□□□□ 0.24
LRCH4O75427 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH4O75427 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LRCH4O75427 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms