Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.25■□□□□ 0.03
LCMT2O60294 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.25■□□□□ 0.03
LCMT2O60294 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.25■□□□□ 0.03
LCMT2O60294 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.25■□□□□ 0.03
LCMT2O60294 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.25■□□□□ 0.03
LCMT2O60294 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.25■□□□□ 0.03
LCMT2O60294 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.25■□□□□ 0.03
LCMT2O60294 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.25■□□□□ 0.03
LCMT2O60294 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.25■□□□□ 0.03
LCMT2O60294 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.25■□□□□ 0.03
LCMT2O60294 AC097359.3-201ENST00000603982 1210 ntBASIC15.25■□□□□ 0.03
LCMT2O60294 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.25■□□□□ 0.03
LCMT2O60294 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LCMT2O60294 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.25■□□□□ 0.03
LCMT2O60294 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.25■□□□□ 0.03
LCMT2O60294 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
LCMT2O60294 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.25■□□□□ 0.03
LCMT2O60294 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LCMT2O60294 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LCMT2O60294 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LCMT2O60294 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.24■□□□□ 0.03
LCMT2O60294 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.24■□□□□ 0.03
LCMT2O60294 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.24■□□□□ 0.03
LCMT2O60294 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LCMT2O60294 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 AC087499.5-201ENST00000452760 1342 ntBASIC15.24■□□□□ 0.03
LCMT2O60294 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LCMT2O60294 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.24■□□□□ 0.03
LCMT2O60294 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.24■□□□□ 0.03
LCMT2O60294 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LCMT2O60294 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.24■□□□□ 0.03
LCMT2O60294 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 TSSK5P-201ENST00000423978 907 ntBASIC15.24■□□□□ 0.03
LCMT2O60294 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.24■□□□□ 0.03
LCMT2O60294 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.24■□□□□ 0.03
LCMT2O60294 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.24■□□□□ 0.03
LCMT2O60294 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.24■□□□□ 0.03
LCMT2O60294 AL390754.1-201ENST00000619088 582 ntBASIC15.24■□□□□ 0.03
LCMT2O60294 MIR6069-201ENST00000620069 79 ntBASIC15.24■□□□□ 0.03
LCMT2O60294 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
LCMT2O60294 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LCMT2O60294 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.24■□□□□ 0.03
LCMT2O60294 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.24■□□□□ 0.03
LCMT2O60294 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LCMT2O60294 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LCMT2O60294 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
LCMT2O60294 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.24■□□□□ 0.03
LCMT2O60294 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LCMT2O60294 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.24■□□□□ 0.03
LCMT2O60294 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
LCMT2O60294 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.24■□□□□ 0.03
LCMT2O60294 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LCMT2O60294 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LCMT2O60294 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LCMT2O60294 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.23■□□□□ 0.03
LCMT2O60294 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
LCMT2O60294 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.23■□□□□ 0.03
LCMT2O60294 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
LCMT2O60294 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.23■□□□□ 0.03
LCMT2O60294 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.23■□□□□ 0.03
LCMT2O60294 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LCMT2O60294 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.23■□□□□ 0.03
LCMT2O60294 AC241585.1-201ENST00000433527 519 ntBASIC15.23■□□□□ 0.03
LCMT2O60294 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.23■□□□□ 0.03
LCMT2O60294 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.23■□□□□ 0.03
LCMT2O60294 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.23■□□□□ 0.03
LCMT2O60294 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.23■□□□□ 0.03
LCMT2O60294 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.23■□□□□ 0.03
LCMT2O60294 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LCMT2O60294 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms