Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.92■□□□□ 0.14
LDB2O43679 HMGN1P19-201ENST00000436976 333 ntBASIC15.92■□□□□ 0.14
LDB2O43679 CNN2P2-201ENST00000443536 909 ntBASIC15.92■□□□□ 0.14
LDB2O43679 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 CNN2P3-201ENST00000450201 906 ntBASIC15.92■□□□□ 0.14
LDB2O43679 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.92■□□□□ 0.14
LDB2O43679 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.92■□□□□ 0.14
LDB2O43679 AC004449.1-201ENST00000564240 433 ntBASIC15.92■□□□□ 0.14
LDB2O43679 AC051619.7-201ENST00000568314 623 ntBASIC15.92■□□□□ 0.14
LDB2O43679 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.92■□□□□ 0.14
LDB2O43679 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.92■□□□□ 0.14
LDB2O43679 AL136317.3-201ENST00000618497 906 ntBASIC15.92■□□□□ 0.14
LDB2O43679 AC093028.1-201ENST00000622998 982 ntBASIC15.92■□□□□ 0.14
LDB2O43679 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.92■□□□□ 0.14
LDB2O43679 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LDB2O43679 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LDB2O43679 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.92■□□□□ 0.14
LDB2O43679 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.92■□□□□ 0.14
LDB2O43679 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LDB2O43679 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 SSR4P1-203ENST00000599569 2260 ntBASIC15.92■□□□□ 0.14
LDB2O43679 AC009090.5-201ENST00000624886 2285 ntBASIC15.92■□□□□ 0.14
LDB2O43679 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LDB2O43679 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LDB2O43679 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LDB2O43679 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
LDB2O43679 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.91■□□□□ 0.14
LDB2O43679 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LDB2O43679 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.91■□□□□ 0.14
LDB2O43679 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.91■□□□□ 0.14
LDB2O43679 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LDB2O43679 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.91■□□□□ 0.14
LDB2O43679 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.91■□□□□ 0.14
LDB2O43679 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
LDB2O43679 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.91■□□□□ 0.14
LDB2O43679 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.91■□□□□ 0.14
LDB2O43679 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.91■□□□□ 0.14
LDB2O43679 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.91■□□□□ 0.14
LDB2O43679 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
LDB2O43679 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.91■□□□□ 0.14
LDB2O43679 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.91■□□□□ 0.14
LDB2O43679 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.91■□□□□ 0.14
LDB2O43679 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.91■□□□□ 0.14
LDB2O43679 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LDB2O43679 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 AC090616.6-203ENST00000579186 1945 ntBASIC15.91■□□□□ 0.14
LDB2O43679 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.91■□□□□ 0.14
LDB2O43679 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LDB2O43679 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.91■□□□□ 0.14
LDB2O43679 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.91■□□□□ 0.14
LDB2O43679 AC136621.1-201ENST00000624017 2304 ntBASIC15.91■□□□□ 0.14
LDB2O43679 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 AL607033.1-201ENST00000623900 1599 ntBASIC15.91■□□□□ 0.14
LDB2O43679 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.91■□□□□ 0.14
LDB2O43679 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LDB2O43679 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LDB2O43679 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
LDB2O43679 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.9■□□□□ 0.14
LDB2O43679 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LDB2O43679 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LDB2O43679 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
LDB2O43679 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LDB2O43679 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LDB2O43679 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LDB2O43679 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LDB2O43679 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LDB2O43679 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms