Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
MSI1O43347 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.55■□□□□ 0.24
MSI1O43347 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
MSI1O43347 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
MSI1O43347 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
MSI1O43347 BTBD7P1-201ENST00000447253 1453 ntBASIC16.54■□□□□ 0.24
MSI1O43347 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.54■□□□□ 0.24
MSI1O43347 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
MSI1O43347 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 AC074338.1-201ENST00000416825 156 ntBASIC16.54■□□□□ 0.24
MSI1O43347 SPTLC1P1-201ENST00000447199 261 ntBASIC16.54■□□□□ 0.24
MSI1O43347 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.54■□□□□ 0.24
MSI1O43347 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.54■□□□□ 0.24
MSI1O43347 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.54■□□□□ 0.24
MSI1O43347 AC074044.1-201ENST00000609673 707 ntBASIC16.54■□□□□ 0.24
MSI1O43347 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.54■□□□□ 0.24
MSI1O43347 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 PRAL-201ENST00000624952 3286 ntBASIC16.54■□□□□ 0.24
MSI1O43347 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
MSI1O43347 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.54■□□□□ 0.24
MSI1O43347 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
MSI1O43347 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
MSI1O43347 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.54■□□□□ 0.24
MSI1O43347 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
MSI1O43347 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.53■□□□□ 0.24
MSI1O43347 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.53■□□□□ 0.24
MSI1O43347 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MSI1O43347 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
MSI1O43347 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
MSI1O43347 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 TARDBPP1-201ENST00000442013 1203 ntBASIC16.53■□□□□ 0.24
MSI1O43347 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.53■□□□□ 0.24
MSI1O43347 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.53■□□□□ 0.24
MSI1O43347 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.53■□□□□ 0.24
MSI1O43347 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.53■□□□□ 0.24
MSI1O43347 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.53■□□□□ 0.24
MSI1O43347 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
MSI1O43347 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.53■□□□□ 0.24
MSI1O43347 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.53■□□□□ 0.24
MSI1O43347 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MSI1O43347 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
MSI1O43347 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.53■□□□□ 0.24
MSI1O43347 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
MSI1O43347 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.53■□□□□ 0.24
MSI1O43347 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.53■□□□□ 0.24
MSI1O43347 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
MSI1O43347 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
MSI1O43347 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
MSI1O43347 Z97205.2-201ENST00000564697 1639 ntBASIC16.52■□□□□ 0.24
MSI1O43347 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
MSI1O43347 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.52■□□□□ 0.24
MSI1O43347 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.52■□□□□ 0.24
MSI1O43347 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
MSI1O43347 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MSI1O43347 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.52■□□□□ 0.24
MSI1O43347 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms