Protein–RNA interactions for Protein: O14874

BCKDK, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDKO14874 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 AC004461.1-201ENST00000412461 403 ntBASIC15.22■□□□□ 0.03
BCKDKO14874 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.22■□□□□ 0.03
BCKDKO14874 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.22■□□□□ 0.03
BCKDKO14874 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.22■□□□□ 0.03
BCKDKO14874 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.22■□□□□ 0.03
BCKDKO14874 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.22■□□□□ 0.03
BCKDKO14874 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.22■□□□□ 0.03
BCKDKO14874 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.22■□□□□ 0.03
BCKDKO14874 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.22■□□□□ 0.03
BCKDKO14874 AC027612.4-201ENST00000605371 583 ntBASIC15.22■□□□□ 0.03
BCKDKO14874 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.22■□□□□ 0.03
BCKDKO14874 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.22■□□□□ 0.03
BCKDKO14874 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
BCKDKO14874 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.22■□□□□ 0.03
BCKDKO14874 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.22■□□□□ 0.03
BCKDKO14874 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.22■□□□□ 0.03
BCKDKO14874 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.22■□□□□ 0.03
BCKDKO14874 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.22■□□□□ 0.03
BCKDKO14874 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
BCKDKO14874 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.22■□□□□ 0.03
BCKDKO14874 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
BCKDKO14874 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
BCKDKO14874 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.21■□□□□ 0.03
BCKDKO14874 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.21■□□□□ 0.03
BCKDKO14874 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.21■□□□□ 0.03
BCKDKO14874 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.21■□□□□ 0.03
BCKDKO14874 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
BCKDKO14874 LINC01144-201ENST00000626198 1710 ntBASIC15.21■□□□□ 0.03
BCKDKO14874 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
BCKDKO14874 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 KRT8P39-201ENST00000396270 1433 ntBASIC15.21■□□□□ 0.03
BCKDKO14874 SSR4P1-203ENST00000599569 2260 ntBASIC15.21■□□□□ 0.03
BCKDKO14874 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.21■□□□□ 0.03
BCKDKO14874 CYMP-203ENST00000474680 1263 ntBASIC15.21■□□□□ 0.03
BCKDKO14874 RN7SL589P-201ENST00000481268 310 ntBASIC15.21■□□□□ 0.03
BCKDKO14874 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
BCKDKO14874 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.21■□□□□ 0.03
BCKDKO14874 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.21■□□□□ 0.03
BCKDKO14874 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.21■□□□□ 0.03
BCKDKO14874 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
BCKDKO14874 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.21■□□□□ 0.03
BCKDKO14874 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
BCKDKO14874 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BCKDKO14874 AC022145.2-201ENST00000598203 171 ntBASIC15.21■□□□□ 0.03
BCKDKO14874 AC026120.1-201ENST00000611536 926 ntBASIC15.21■□□□□ 0.03
BCKDKO14874 AL161645.1-201ENST00000622716 1255 ntBASIC15.21■□□□□ 0.03
BCKDKO14874 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
BCKDKO14874 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
BCKDKO14874 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BCKDKO14874 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
BCKDKO14874 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
BCKDKO14874 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.2■□□□□ 0.02
BCKDKO14874 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
BCKDKO14874 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BCKDKO14874 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BCKDKO14874 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BCKDKO14874 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
BCKDKO14874 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BCKDKO14874 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BCKDKO14874 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.2■□□□□ 0.02
BCKDKO14874 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BCKDKO14874 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BCKDKO14874 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
BCKDKO14874 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.2■□□□□ 0.02
BCKDKO14874 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.2■□□□□ 0.02
BCKDKO14874 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.2■□□□□ 0.02
BCKDKO14874 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms