Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SOCS3O14543 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 SSR4P1-203ENST00000599569 2260 ntBASIC12.04□□□□□ -0.48
SOCS3O14543 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.04□□□□□ -0.48
SOCS3O14543 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.04□□□□□ -0.48
SOCS3O14543 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.04□□□□□ -0.48
SOCS3O14543 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SOCS3O14543 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
SOCS3O14543 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SOCS3O14543 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.04□□□□□ -0.48
SOCS3O14543 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 DNAJB3-201ENST00000446806 729 ntBASIC12.04□□□□□ -0.48
SOCS3O14543 AL139010.1-201ENST00000454878 894 ntBASIC12.04□□□□□ -0.48
SOCS3O14543 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.04□□□□□ -0.48
SOCS3O14543 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.04□□□□□ -0.48
SOCS3O14543 RARRES2P9-201ENST00000565168 469 ntBASIC12.04□□□□□ -0.48
SOCS3O14543 AC005829.1-201ENST00000570002 483 ntBASIC12.04□□□□□ -0.48
SOCS3O14543 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.04□□□□□ -0.48
SOCS3O14543 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.04□□□□□ -0.48
SOCS3O14543 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.04□□□□□ -0.48
SOCS3O14543 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SOCS3O14543 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.04□□□□□ -0.48
SOCS3O14543 AC055717.3-201ENST00000622967 595 ntBASIC12.04□□□□□ -0.48
SOCS3O14543 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 AL513210.1-201ENST00000629608 234 ntBASIC12.04□□□□□ -0.48
SOCS3O14543 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
SOCS3O14543 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 AC018892.3-201ENST00000623986 2499 ntBASIC12.04□□□□□ -0.48
SOCS3O14543 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.04□□□□□ -0.48
SOCS3O14543 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.04□□□□□ -0.48
SOCS3O14543 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SOCS3O14543 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SOCS3O14543 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.03□□□□□ -0.48
SOCS3O14543 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SOCS3O14543 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.03□□□□□ -0.48
SOCS3O14543 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 AC013268.4-201ENST00000637413 2228 ntBASIC12.03□□□□□ -0.48
SOCS3O14543 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 AC073347.1-201ENST00000421633 2643 ntBASIC12.03□□□□□ -0.48
SOCS3O14543 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.03□□□□□ -0.48
SOCS3O14543 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.03□□□□□ -0.48
SOCS3O14543 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.03□□□□□ -0.48
SOCS3O14543 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.03□□□□□ -0.48
SOCS3O14543 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.03□□□□□ -0.48
SOCS3O14543 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.03□□□□□ -0.48
SOCS3O14543 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.03□□□□□ -0.48
SOCS3O14543 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SOCS3O14543 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms