Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 TMBIM7P-203ENST00000641617 1718 ntBASIC11.32□□□□□ -0.6
TMEM238C9JI98 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 LINC01101-201ENST00000622953 1884 ntBASIC11.32□□□□□ -0.6
TMEM238C9JI98 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 HES2-202ENST00000377836 507 ntTSL 2 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 COX5BP2-201ENST00000392354 334 ntBASIC11.32□□□□□ -0.6
TMEM238C9JI98 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 AC009947.2-201ENST00000444014 672 ntBASIC11.32□□□□□ -0.6
TMEM238C9JI98 GXYLT1P6-201ENST00000456472 1187 ntBASIC11.32□□□□□ -0.6
TMEM238C9JI98 AL355075.4-201ENST00000554988 638 ntBASIC11.32□□□□□ -0.6
TMEM238C9JI98 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 AC111152.3-201ENST00000569699 673 ntBASIC11.32□□□□□ -0.6
TMEM238C9JI98 MIR3917-201ENST00000580971 93 ntBASIC11.32□□□□□ -0.6
TMEM238C9JI98 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 AL139011.1-202ENST00000642063 584 ntBASIC11.32□□□□□ -0.6
TMEM238C9JI98 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 GGT3P-204ENST00000453783 1664 ntBASIC11.32□□□□□ -0.6
TMEM238C9JI98 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
TMEM238C9JI98 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
TMEM238C9JI98 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 DDT-203ENST00000403754 569 ntTSL 3 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
TMEM238C9JI98 DDT-206ENST00000430101 573 ntTSL 2 BASIC11.31□□□□□ -0.6
TMEM238C9JI98 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms