Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.24□□□□□ -0.61
LINC01546A6NGU7 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 AL671277.2-201ENST00000458060 996 ntBASIC11.24□□□□□ -0.61
LINC01546A6NGU7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 AC243562.2-201ENST00000561247 970 ntBASIC11.24□□□□□ -0.61
LINC01546A6NGU7 AL136038.3-201ENST00000561909 1096 ntBASIC11.24□□□□□ -0.61
LINC01546A6NGU7 AC002347.1-201ENST00000569543 541 ntBASIC11.24□□□□□ -0.61
LINC01546A6NGU7 MIR5100-201ENST00000579544 119 ntBASIC11.24□□□□□ -0.61
LINC01546A6NGU7 NKAPP1-205ENST00000585790 367 ntBASIC11.24□□□□□ -0.61
LINC01546A6NGU7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 AL031055.1-201ENST00000606362 631 ntBASIC11.24□□□□□ -0.61
LINC01546A6NGU7 AL121672.3-201ENST00000608644 468 ntBASIC11.24□□□□□ -0.61
LINC01546A6NGU7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 CICP17-201ENST00000418553 2377 ntBASIC11.23□□□□□ -0.61
LINC01546A6NGU7 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 AC097359.2-201ENST00000604992 2389 ntBASIC11.23□□□□□ -0.61
LINC01546A6NGU7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 AL137013.1-201ENST00000432946 1228 ntBASIC11.23□□□□□ -0.61
LINC01546A6NGU7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
LINC01546A6NGU7 BX276092.5-203ENST00000456199 560 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms