Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RNA5SP410-201ENST00000516285 106 ntBASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA11Q9Y5H2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 HLA-H-201ENST00000383620 1096 ntBASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 AC243562.2-201ENST00000561247 970 ntBASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 PRAL-201ENST00000624952 3286 ntBASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 PPT1-215ENST00000641471 2368 ntBASIC15.53■□□□□ 0.08
PCDHGA11Q9Y5H2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 AL592309.1-201ENST00000443127 649 ntBASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 CEND1P1-201ENST00000451006 455 ntBASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 AC084121.4-201ENST00000641598 221 ntBASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 AF228730.8-201ENST00000642140 221 ntBASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
PCDHGA11Q9Y5H2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA11Q9Y5H2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA11Q9Y5H2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHGA11Q9Y5H2 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA11Q9Y5H2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms