Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 KRT18P48-201ENST00000434763 852 ntBASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 BX276092.5-203ENST00000456199 560 ntBASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 AL592424.1-201ENST00000563624 1536 ntBASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.26■□□□□ 0.03
LRCH1Q9Y2L9 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 AL353593.2-201ENST00000602529 1483 ntBASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
LRCH1Q9Y2L9 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LRCH1Q9Y2L9 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH1Q9Y2L9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.24■□□□□ 0.03
LRCH1Q9Y2L9 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH1Q9Y2L9 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH1Q9Y2L9 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH1Q9Y2L9 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.24■□□□□ 0.03
LRCH1Q9Y2L9 COL6A4P2-202ENST00000504443 2753 ntBASIC15.24■□□□□ 0.03
LRCH1Q9Y2L9 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRCH1Q9Y2L9 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
LRCH1Q9Y2L9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms