Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.28□□□□□ -0.12
FOXD3Q9UJU5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
FOXD3Q9UJU5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.28□□□□□ -0.12
FOXD3Q9UJU5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.28□□□□□ -0.12
FOXD3Q9UJU5 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
FOXD3Q9UJU5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FOXD3Q9UJU5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FOXD3Q9UJU5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
FOXD3Q9UJU5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FOXD3Q9UJU5 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 AL691432.1-201ENST00000596308 1422 ntBASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FOXD3Q9UJU5 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 SPDYE17-201ENST00000412399 783 ntBASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 SDHAP3-202ENST00000515467 728 ntBASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 AC011477.6-201ENST00000604980 1927 ntBASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.27□□□□□ -0.13
FOXD3Q9UJU5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 AP006294.1-201ENST00000415407 339 ntBASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 AL139010.1-201ENST00000454878 894 ntBASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 API5-211ENST00000534695 560 ntTSL 5 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 AC243562.2-201ENST00000561247 970 ntBASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.26□□□□□ -0.13
FOXD3Q9UJU5 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms