Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 AC093433.1-201ENST00000458048 571 ntBASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 RN7SL219P-201ENST00000582872 296 ntBASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 MIR6869-201ENST00000619434 62 ntBASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GTF2IRD1Q9UHL9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 FAM21FP-201ENST00000426241 1131 ntBASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 AC124067.4-201ENST00000519691 2379 ntBASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
GTF2IRD1Q9UHL9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 AC106760.1-201ENST00000508690 800 ntBASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 AC026410.3-201ENST00000514280 936 ntBASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.4■□□□□ 0.38
GTF2IRD1Q9UHL9 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms