Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL20A1Q9P218 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL20A1Q9P218 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COL20A1Q9P218 KRT8P22-201ENST00000562317 1415 ntBASIC17.89■□□□□ 0.46
COL20A1Q9P218 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COL20A1Q9P218 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
COL20A1Q9P218 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL20A1Q9P218 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL20A1Q9P218 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL20A1Q9P218 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.89■□□□□ 0.45
COL20A1Q9P218 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL20A1Q9P218 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
COL20A1Q9P218 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.89■□□□□ 0.45
COL20A1Q9P218 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.89■□□□□ 0.45
COL20A1Q9P218 CROCCP4-201ENST00000457096 498 ntBASIC17.89■□□□□ 0.45
COL20A1Q9P218 KRT18P43-201ENST00000469825 1281 ntBASIC17.89■□□□□ 0.45
COL20A1Q9P218 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.89■□□□□ 0.45
COL20A1Q9P218 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.89■□□□□ 0.45
COL20A1Q9P218 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.89■□□□□ 0.45
COL20A1Q9P218 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.89■□□□□ 0.45
COL20A1Q9P218 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
COL20A1Q9P218 AC133539.2-201ENST00000604757 467 ntBASIC17.89■□□□□ 0.45
COL20A1Q9P218 CU634019.7-201ENST00000624153 1185 ntBASIC17.89■□□□□ 0.45
COL20A1Q9P218 FP236241.2-201ENST00000624906 1185 ntBASIC17.89■□□□□ 0.45
COL20A1Q9P218 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.89■□□□□ 0.45
COL20A1Q9P218 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL20A1Q9P218 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
COL20A1Q9P218 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
COL20A1Q9P218 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.89■□□□□ 0.45
COL20A1Q9P218 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
COL20A1Q9P218 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.89■□□□□ 0.45
COL20A1Q9P218 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.89■□□□□ 0.45
COL20A1Q9P218 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 AC119751.2-201ENST00000504529 210 ntBASIC17.88■□□□□ 0.45
COL20A1Q9P218 SNX29P1-201ENST00000548357 1007 ntBASIC17.88■□□□□ 0.45
COL20A1Q9P218 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 RAB43P1-201ENST00000561790 589 ntBASIC17.88■□□□□ 0.45
COL20A1Q9P218 AC120045.2-201ENST00000567334 178 ntBASIC17.88■□□□□ 0.45
COL20A1Q9P218 MIR5189-201ENST00000577370 114 ntBASIC17.88■□□□□ 0.45
COL20A1Q9P218 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 AL359881.2-201ENST00000602973 570 ntBASIC17.88■□□□□ 0.45
COL20A1Q9P218 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 AL512343.1-201ENST00000605837 169 ntBASIC17.88■□□□□ 0.45
COL20A1Q9P218 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 OR6D1P-202ENST00000641007 5290 ntBASIC17.88■□□□□ 0.45
COL20A1Q9P218 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.88■□□□□ 0.45
COL20A1Q9P218 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
COL20A1Q9P218 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
COL20A1Q9P218 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
COL20A1Q9P218 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL20A1Q9P218 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL20A1Q9P218 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL20A1Q9P218 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL20A1Q9P218 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
COL20A1Q9P218 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL20A1Q9P218 MIR1909-201ENST00000411312 80 ntBASIC17.87■□□□□ 0.45
COL20A1Q9P218 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
COL20A1Q9P218 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL20A1Q9P218 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL20A1Q9P218 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.87■□□□□ 0.45
COL20A1Q9P218 MIR4259-201ENST00000584466 101 ntBASIC17.87■□□□□ 0.45
COL20A1Q9P218 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC17.87■□□□□ 0.45
COL20A1Q9P218 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.87■□□□□ 0.45
COL20A1Q9P218 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL20A1Q9P218 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.87■□□□□ 0.45
COL20A1Q9P218 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL20A1Q9P218 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
COL20A1Q9P218 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL20A1Q9P218 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL20A1Q9P218 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
COL20A1Q9P218 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.87■□□□□ 0.45
COL20A1Q9P218 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.87■□□□□ 0.45
COL20A1Q9P218 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.87■□□□□ 0.45
COL20A1Q9P218 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.87■□□□□ 0.45
COL20A1Q9P218 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.87■□□□□ 0.45
COL20A1Q9P218 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms