Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.03□□□□□ -0.16
ELL3Q9HB65 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.03□□□□□ -0.16
ELL3Q9HB65 AC106730.1-201ENST00000566722 1090 ntBASIC14.03□□□□□ -0.16
ELL3Q9HB65 MIR4515-201ENST00000584082 81 ntBASIC14.03□□□□□ -0.16
ELL3Q9HB65 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 AC140113.2-201ENST00000604370 208 ntBASIC14.03□□□□□ -0.16
ELL3Q9HB65 AC021097.1-201ENST00000607902 574 ntBASIC14.03□□□□□ -0.16
ELL3Q9HB65 AC064836.3-201ENST00000607928 673 ntBASIC14.03□□□□□ -0.16
ELL3Q9HB65 AC010507.1-201ENST00000633895 436 ntBASIC14.03□□□□□ -0.16
ELL3Q9HB65 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 ZNF259P1-201ENST00000407656 1365 ntBASIC14.03□□□□□ -0.16
ELL3Q9HB65 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
ELL3Q9HB65 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
ELL3Q9HB65 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ELL3Q9HB65 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ELL3Q9HB65 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ELL3Q9HB65 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.02□□□□□ -0.16
ELL3Q9HB65 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
ELL3Q9HB65 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ELL3Q9HB65 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
ELL3Q9HB65 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ELL3Q9HB65 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.02□□□□□ -0.16
ELL3Q9HB65 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ELL3Q9HB65 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.02□□□□□ -0.16
ELL3Q9HB65 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.02□□□□□ -0.16
ELL3Q9HB65 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ELL3Q9HB65 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.02□□□□□ -0.16
ELL3Q9HB65 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.02□□□□□ -0.16
ELL3Q9HB65 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ELL3Q9HB65 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ELL3Q9HB65 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.02□□□□□ -0.17
ELL3Q9HB65 MED15P5-201ENST00000423150 992 ntBASIC14.02□□□□□ -0.17
ELL3Q9HB65 PRSS29P-201ENST00000440800 595 ntBASIC14.02□□□□□ -0.17
ELL3Q9HB65 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.02□□□□□ -0.17
ELL3Q9HB65 HCG4B-203ENST00000450128 991 ntBASIC14.02□□□□□ -0.17
ELL3Q9HB65 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.02□□□□□ -0.17
ELL3Q9HB65 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.02□□□□□ -0.17
ELL3Q9HB65 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.02□□□□□ -0.17
ELL3Q9HB65 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.02□□□□□ -0.17
ELL3Q9HB65 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.02□□□□□ -0.17
ELL3Q9HB65 AL031055.1-201ENST00000606362 631 ntBASIC14.02□□□□□ -0.17
ELL3Q9HB65 ACTL9-202ENST00000612068 1252 ntBASIC14.02□□□□□ -0.17
ELL3Q9HB65 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ELL3Q9HB65 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.02□□□□□ -0.17
ELL3Q9HB65 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ELL3Q9HB65 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.02□□□□□ -0.17
ELL3Q9HB65 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ELL3Q9HB65 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ELL3Q9HB65 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ELL3Q9HB65 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ELL3Q9HB65 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
ELL3Q9HB65 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ELL3Q9HB65 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.02□□□□□ -0.17
ELL3Q9HB65 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ELL3Q9HB65 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ELL3Q9HB65 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.02□□□□□ -0.17
ELL3Q9HB65 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.02□□□□□ -0.17
ELL3Q9HB65 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ELL3Q9HB65 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ELL3Q9HB65 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 AL592424.1-201ENST00000563624 1536 ntBASIC14.01□□□□□ -0.17
ELL3Q9HB65 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ELL3Q9HB65 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms