Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 KRT18P32-201ENST00000424695 1287 ntBASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 AP000344.2-201ENST00000512987 629 ntBASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.23■□□□□ 0.19
LRRC40Q9H9A6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 AC004461.1-201ENST00000412461 403 ntBASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 AL627223.1-201ENST00000416693 442 ntBASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 ALG1L8P-201ENST00000533887 760 ntBASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 AC010327.4-202ENST00000591484 748 ntBASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 PKD1P5-201ENST00000532415 10291 ntBASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 AC092850.2-201ENST00000623821 2697 ntBASIC16.22■□□□□ 0.19
LRRC40Q9H9A6 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 CICP13-201ENST00000422015 2789 ntBASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 SSR4P1-203ENST00000599569 2260 ntBASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 KRT8P37-201ENST00000451609 1420 ntBASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC40Q9H9A6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms