Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP3Q9BWW4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 AC236430.1-201ENST00000402231 743 ntBASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 AC002472.2-201ENST00000442739 958 ntBASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 MIR6069-201ENST00000620069 79 ntBASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP3Q9BWW4 AL662844.4-201ENST00000606367 2838 ntBASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 AC026691.1-201ENST00000602502 2017 ntBASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 SPDYE17-201ENST00000412399 783 ntBASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.35□□□□□ -0.27
SSBP3Q9BWW4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms