Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 PPT1-215ENST00000641471 2368 ntBASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CMSS1Q9BQ75 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 CLEC4GP1-201ENST00000596555 870 ntBASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 AC008677.1-201ENST00000519230 1561 ntBASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.73□□□□□ -0.21
CMSS1Q9BQ75 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 HMGA1P7-201ENST00000406908 502 ntBASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 FAM185BP-201ENST00000443595 716 ntBASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 AC108073.2-201ENST00000464002 357 ntBASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 RNPS1P1-201ENST00000507437 918 ntBASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 MIR3909-201ENST00000579518 119 ntBASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 ACTL9-202ENST00000612068 1252 ntBASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 AC004790.2-201ENST00000623588 572 ntBASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CMSS1Q9BQ75 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms